LOCUS       AEC06944.1               977 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RNA-dependent RNA polymerase family
            protein protein.
ACCESSION   CP002685-2107
PROTEIN_ID  AEC06944.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G19930"
                     /gene_synonym="F6F22.4"
                     /gene_synonym="F6F22_4"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EG472349.1,INSD:AU237870.1,INSD:EG472281.1,
                     INSD:ES059084.1,INSD:EL248091.1,INSD:BP608532.1,
                     INSD:EG472280.1,INSD:EG472348.1,INSD:AU228971.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:DQ069819.1,INSD:AK229381.1"
                     /note="RNA-dependent RNA polymerase family protein;
                     FUNCTIONS IN: RNA-directed RNA polymerase activity;
                     INVOLVED IN: posttranscriptional gene silencing; LOCATED
                     IN: cellular_component unknown; EXPRESSED IN: 14 plant
                     structures; EXPRESSED DURING: 6 growth stages; CONTAINS
                     InterPro DOMAIN/s: RNA-dependent RNA polymerase,
                     eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis
                     thaliana protein match is: RNA-dependent RNA polymerase
                     family protein (TAIR:AT2G19910.1); Has 35333 Blast hits to
                     34131 proteins in 2444 species: Archae - 798; Bacteria -
                     22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
                     0; Other Eukaryotes - 9610 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G19930"
                     /db_xref="TAIR:AT2G19930"
     intron_pos      103:1 (1/17)
     intron_pos      151:2 (2/17)
     intron_pos      195:0 (3/17)
     intron_pos      225:0 (4/17)
     intron_pos      286:1 (5/17)
     intron_pos      352:2 (6/17)
     intron_pos      382:0 (7/17)
     intron_pos      430:0 (8/17)
     intron_pos      437:0 (9/17)
     intron_pos      461:0 (10/17)
     intron_pos      496:2 (11/17)
     intron_pos      546:1 (12/17)
     intron_pos      620:2 (13/17)
     intron_pos      696:0 (14/17)
     intron_pos      745:2 (15/17)
     intron_pos      847:1 (16/17)
     intron_pos      900:0 (17/17)
BEGIN
        1 MNQASSRIRI ALSGRIETAL ENIYRKHNLT PINDETRQRL SSIPENLGFE LVRKVFSLQA
       61 GLIYNLDSFI VSKVNQAVSF TGYPQPANSL SPSGRHVSRV LQEEMSVDSD APSPKSLKSE
      121 DKGGSLHIPQ LVALGELEFK KVFLLLSYIP GQHVGQVITA DEIRLWKDLP MVEYEAAVWD
      181 RLGRHYCPQK DRRMLQWDSG KTHYYQCNVA PNGSYTFKVL SALQGPLLEH TGTHLHKVLG
      241 DDNVLTVKFA DVQKSSSTYS IDHYFTYKGI AKNGIMIGLR RYQFFVFKDG GKEEKKKDLS
      301 TKKVKCYFIR TDSTAFYDMQ NPYILTGKSI YEARMHFMHV HRAPTLANYM ARFSLILSKT
      361 KTLEVDMTGI TFDQIDDIHC HDQDGKDVLD KNKKPCIHSD GTGYISEDLA RMCPLNIFKG
      421 KCLRSESIQE ACYQDPPLLI QFRMFYDGYA VKGTFLLNKK LCPRTVQVRP SMIKVSKDPS
      481 LSNFSTFNAL EVVTTSNPPK RTKLSKNLVA LLSYGGIPNE FFLDILLNTL EESKSIFYNK
      541 RAALNAALNY GEMDDQNAAQ MILVGIPLDE PHLKNYLSIL LKTEKNDLKA GKLPVTESYY
      601 LMGTVDPTGA LKEDEVCVIL ESGQISGEVL VYRNPGLHFG DIHILKATYV KALEEYVGNS
      661 KFAVFFPQKG PRSLGDEIAG GDFDGDMYFI SRNPELLENF KPSEPWVSLT PPSKSNSGRA
      721 PSQLSPEELE EELFEMFLTA GFHASNVIGI AADSWLTIMD RFLILGDDRA EEKAEMKKKM
      781 LELIDIYYDA LDAPKKGDKV YLPNKLKPDI FPHYMERDKK FQSTSILGLI FDFVKSQTTE
      841 EPSPSSEISK LPCFEDEPVS EFHMQKCRLW YDNYRTEMTQ AMKTDKDESA NEVIQRYKQE
      901 FYGAAGFEDS KKSLEELYPQ ALALYKIVYD YAIHAGVSKC RFVWKVAGPV LCRFYLNKKM
      961 QEKCLVCAPS VLKELWG
//