LOCUS AEC06943.1 927 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA-dependent RNA polymerase family
protein protein.
ACCESSION CP002685-2104
PROTEIN_ID AEC06943.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G19920"
/gene_synonym="F6F22.5"
/gene_synonym="F6F22_5"
/inference="Similar to RNA sequence,
EST:INSD:EL288227.1,INSD:EL290139.1"
/note="RNA-dependent RNA polymerase family protein;
CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase,
eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis
thaliana protein match is: RNA-dependent RNA polymerase
family protein (TAIR:AT2G19910.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G19920"
/db_xref="TAIR:AT2G19920"
intron_pos 118:1 (1/17)
intron_pos 166:2 (2/17)
intron_pos 205:0 (3/17)
intron_pos 230:0 (4/17)
intron_pos 290:1 (5/17)
intron_pos 356:2 (6/17)
intron_pos 386:0 (7/17)
intron_pos 434:0 (8/17)
intron_pos 441:0 (9/17)
intron_pos 465:0 (10/17)
intron_pos 500:2 (11/17)
intron_pos 550:1 (12/17)
intron_pos 621:1 (13/17)
intron_pos 696:0 (14/17)
intron_pos 745:2 (15/17)
intron_pos 846:1 (16/17)
intron_pos 899:0 (17/17)
BEGIN
1 MMTTTMDYNS SDQGFSWSEI ALLGSVETML EKVYGKHNHH PPIKVETRRR LSSISEELAL
61 ETLRKVLNMP NVKTLDGIII YFLNDAVTVD GSPRLWSGES PVQFPRTPGK KSCRASQAEV
121 SLDREDPSPK FLRGDENGES KHISLLLALG ELEFKKAFLL LTYLGGKSLG EVISGDEIRQ
181 WKDLPMVAYE RAVWFKLGQN EERMQLESDS GKTHYYQCHV APDGSYRLKG YFLENTGTHL
241 HKVLGDDNVL TVRFDQLPKE STYCDNPYSK YKEIAKNGIM VGLRRYQFFV FKDGGKAEKK
301 KRNSTKQVKC YFIRTGSTAS SDMENPYILS GMSIHEARMH FMHVHTLPSP ANYMARFSLI
361 LSKTKKLEVD MTEITVMQID DIHCHDQSNN DVLDKNGKPR IHSDGTGYIS EDLARMCPLN
421 IFKGKSMRSN NIQGTCVQEP PLLIQIRMFN DGSAVKGIFL LNKNLPPQTV QVRPSMIKVY
481 KDKNLSNFST FNSLEVVTTS NPPKRAKLSK NLVALLSYGG VPNDFFLDIL LNTLEKKKTI
541 FFKVRAAGKA ALHYGNMDDK NALQMIMAGI PLDEPYLKHY LSKLLKLEKD DLKAGKLPID
601 ESYYLMGTVD PTGELKEDEV SGLAKSQDVL VYRNPGLHFG DIHILKATYV KSLEQYVGNS
661 KYGVFFPQKG PRSLGDEIAG GDFDGDMYFI SRNPKLLEHY KPSEPWVSSS PRSKIYTGRQ
721 PSELSPEQLE EELFKIFLKT GFSPSSVIGQ AADSWLAIMD RFLTLGDENV KEKAEMKKKM
781 LKLTDIYYDA IDAPKTGTEV NLPLDVKVDL FPHYMERNKT FKSTSILGLI FDTVDFHNAE
841 DTTPSGISKL QCFEDEPVSE FDMEKCKLWH KDYRKEMCQA MNSDDDDSCN EVIQKYKQEF
901 YSAAGFKESK KILEELYPKA LALYNVT
//