LOCUS AEC06931.2 194 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SNF7 family protein protein.
ACCESSION CP002685-2086
PROTEIN_ID AEC06931.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SNF7.2"
/locus_tag="AT2G19830"
/gene_synonym="F6F22.14"
/gene_synonym="F6F22_14"
/gene_synonym="VPS32"
/inference="Similar to RNA sequence,
EST:INSD:BP829957.1,INSD:BP860991.1,INSD:EG441771.1,
INSD:BP670592.1,INSD:CB263558.1,INSD:EL244510.1,
INSD:EL043826.1,INSD:EG441770.1,INSD:DR364853.1,
INSD:T76080.1,INSD:EL066019.1,INSD:EH991330.1,
INSD:EH984865.1,INSD:AV783420.1,INSD:EL000767.1,
INSD:CB262937.1,INSD:EH821705.1,INSD:BP587073.1,
INSD:EL334696.1,INSD:ES033535.1,INSD:ES082144.1,
INSD:EH873699.1,INSD:AV819546.1,INSD:EG441218.1,
INSD:EL284394.1,INSD:DR364852.1,INSD:EG441217.1,
INSD:AI992704.1,INSD:EL137171.1,INSD:EH961228.1,
INSD:EL067787.1,INSD:AV790300.1,INSD:EL294913.1,
INSD:EL328104.1,INSD:EL086972.1,INSD:EG441215.1,
INSD:BP815762.1,INSD:EL258924.1,INSD:EL116386.1,
INSD:EL122675.1,INSD:EL338634.1,INSD:EL239290.1,
INSD:EL130947.1,INSD:EL319652.1,INSD:BP588987.1,
INSD:EL119295.1,INSD:EL013441.1,INSD:BP863405.1,
INSD:EH908979.1,INSD:EL137820.1,INSD:EH863999.1,
INSD:ES059005.1,INSD:EH985508.1,INSD:ES039524.1,
INSD:EL015205.1,INSD:BP640037.1,INSD:CB263686.1,
INSD:EL326270.1,INSD:ES089927.1,INSD:EL035044.1,
INSD:ES210159.1,INSD:EL278220.1,INSD:EL281735.1,
INSD:ES171784.1,INSD:DR354552.1,INSD:EL311247.1,
INSD:EL267612.1,INSD:EL126237.1,INSD:ES032934.1,
INSD:AV822616.1,INSD:EH951816.1,INSD:EL341307.1,
INSD:EH954411.1,INSD:EL045101.1,INSD:EL219962.1,
INSD:ES148748.1,INSD:EL042410.1,INSD:ES019234.1,
INSD:EH834986.1,INSD:EL323114.1,INSD:EL090077.1,
INSD:BP837969.1,INSD:BP863813.2,INSD:DR364855.1,
INSD:EH935506.1,INSD:BP611287.1,INSD:EH987180.1,
INSD:ES154988.1,INSD:EH849857.1,INSD:T76152.1,
INSD:ES175052.1,INSD:ES065318.1,INSD:EL309746.1,
INSD:ES100549.1,INSD:EL978132.1,INSD:BP806832.1,
INSD:EH947221.1,INSD:EL998791.1,INSD:ES004377.1,
INSD:EH875592.1,INSD:BP844668.1,INSD:DR364856.1,
INSD:BX840730.1,INSD:BP849352.1,INSD:BP858272.1,
INSD:EH907123.1,INSD:EG441216.1,INSD:EL228381.1,
INSD:DR364854.1,INSD:EL078180.1,INSD:T41702.1,
INSD:EL140059.1,INSD:BP654619.1,INSD:EH957564.1,
INSD:EL081563.1,INSD:EL204191.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX818948.1,INSD:AY079421.1,INSD:AY045911.1"
/note="SNF7.2; INVOLVED IN: vesicle-mediated transport;
LOCATED IN: ESCRT III complex, plasma membrane; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Snf7
(InterPro:IPR005024); BEST Arabidopsis thaliana protein
match is: SNF7 family protein (TAIR:AT4G29160.3); Has 1789
Blast hits to 1789 proteins in 248 species: Archae - 16;
Bacteria - 15; Metazoa - 681; Fungi - 406; Plants - 433;
Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink)."
/db_xref="Araport:AT2G19830"
/db_xref="TAIR:AT2G19830"
intron_pos 40:1 (1/4)
intron_pos 69:0 (2/4)
intron_pos 99:2 (3/4)
intron_pos 137:0 (4/4)
BEGIN
1 MLLLVQTLEM LEKKENVLLK KATGEVEKAK EFSRAKNKRA AIQCLKRKRL YEQQVEQLGN
61 FQLRIHDQMI MLEGAKATTE TVDALRTGAS AMKAMQKATN IDDVDKTMDE INEQTENMKQ
121 IQEALSAPFG ANDFDEDELE AELDELEGAE LEEQLLQPVP IHVPQGNKPA RAPAQKQPTA
181 EEDELAALQA EMAL
//