LOCUS AEC06926.1 143 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SNARE-like superfamily protein protein.
ACCESSION CP002685-2080
PROTEIN_ID AEC06926.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G19790"
/gene_synonym="F6F22.18"
/gene_synonym="F6F22_18"
/inference="Similar to RNA sequence,
EST:INSD:DR213020.1,INSD:DR213027.1,INSD:DR213007.1,
INSD:DR213036.1,INSD:DR213032.1,INSD:DR213031.1,
INSD:EL131396.1,INSD:H36416.1,INSD:EL097160.1,
INSD:DR213008.1,INSD:DR213028.1,INSD:DR213021.1,
INSD:DR213014.1,INSD:EL290219.1,INSD:DR213038.1,
INSD:AV822530.1,INSD:DR213029.1,INSD:DR213033.1,
INSD:DR213015.1,INSD:EL211375.1,INSD:ES167319.1,
INSD:DR213010.1,INSD:DR213034.1,INSD:EG467959.1,
INSD:DR213005.1,INSD:DR213019.1,INSD:DR213006.1,
INSD:DR213024.1,INSD:EG479032.1,INSD:DR213022.1,
INSD:DR370792.1,INSD:DR213023.1,INSD:DR213009.1,
INSD:BP561206.1,INSD:DR213026.1,INSD:DR232260.1,
INSD:EH822087.1,INSD:ES000039.1,INSD:DR213011.1,
INSD:BP597360.1,INSD:EG481025.1,INSD:DR213025.1,
INSD:DR377224.1,INSD:EH871408.1,INSD:DR213017.1,
INSD:EG523267.1,INSD:DR213018.1,INSD:DR213037.1,
INSD:EL105875.1,INSD:DR213035.1,INSD:DR213030.1,
INSD:DR377605.1,INSD:EL972916.1,INSD:EH923201.1,
INSD:EL066423.1,INSD:DR213016.1,INSD:EL096338.1,
INSD:EL009618.1,INSD:AV785464.1,INSD:DR213039.1,
INSD:EL143231.1,INSD:DR213012.1,INSD:DR213013.1,
INSD:AA651129.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF370185.1,INSD:AY088273.1,INSD:AY059143.1"
/note="SNARE-like superfamily protein; FUNCTIONS IN:
protein transporter activity; INVOLVED IN: intracellular
protein transport, transport, protein transport; LOCATED
IN: clathrin vesicle coat; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Adaptor protein complex, sigma subunit
(InterPro:IPR016635), Longin-like (InterPro:IPR011012);
BEST Arabidopsis thaliana protein match is: SNARE-like
superfamily protein (TAIR:AT1G47830.1); Has 1921 Blast
hits to 1920 proteins in 249 species: Archae - 0; Bacteria
- 0; Metazoa - 856; Fungi - 405; Plants - 316; Viruses -
0; Other Eukaryotes - 344 (source: NCBI BLink)."
/db_xref="Araport:AT2G19790"
/db_xref="TAIR:AT2G19790"
intron_pos 48:0 (1/3)
intron_pos 77:0 (2/3)
intron_pos 100:0 (3/3)
BEGIN
1 MGIRFILMVN KQGQTRLAQY YEWLTLEERR ALEGEIVRKC LARNDQQCSF VEHRNYKIVY
61 RRYASLFFMV GVDDDENELA ILEFIHLLVE TMDKHFGNVC ELDIMFHLEK AHFMLEEMVM
121 NGCIVETSKA NILSPIQLMD KAH
//