LOCUS AEC06916.1 937 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Regulator of Vps4 activity in the
MVB pathway protein protein.
ACCESSION CP002685-2070
PROTEIN_ID AEC06916.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G19710"
/gene_synonym="F6F22.26"
/gene_synonym="F6F22_26"
/inference="Similar to RNA sequence,
EST:INSD:EL002382.1,INSD:EH891005.1,INSD:ES069957.1,
INSD:DR378547.1,INSD:ES164780.1,INSD:ES114725.1,
INSD:ES167361.1,INSD:ES143299.1,INSD:BP862872.1,
INSD:ES094993.1,INSD:EL045962.1,INSD:DR362212.1,
INSD:EG495922.1,INSD:AV548011.1,INSD:ES093920.1,
INSD:ES192171.1,INSD:ES000836.1,INSD:EH954680.1,
INSD:ES065819.1,INSD:EG435013.1,INSD:ES102855.1,
INSD:ES025154.1,INSD:AV548146.1,INSD:ES019154.1,
INSD:Z26126.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT010458.1,INSD:AK229767.1,INSD:BX819674.1"
/note="Regulator of Vps4 activity in the MVB pathway
protein; INVOLVED IN: biological_process unknown;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF292, eukaryotic (InterPro:IPR005061);
BEST Arabidopsis thaliana protein match is: Regulator of
Vps4 activity in the MVB pathway protein
(TAIR:AT4G29440.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G19710"
/db_xref="TAIR:AT2G19710"
intron_pos 14:2 (1/6)
intron_pos 59:0 (2/6)
intron_pos 93:2 (3/6)
intron_pos 151:0 (4/6)
intron_pos 197:0 (5/6)
intron_pos 277:1 (6/6)
BEGIN
1 MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE
61 HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK EAVTSVLFAS QRLSDVPELS
121 EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW
181 EAQSFVESDP KDTELLNGAN SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH
241 HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301 QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE
361 PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR YDRAEQIPPV DQPSGRHSVD
421 NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS
481 PSIVEENIFA TEYDHQSQSS FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY
541 QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601 PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV
661 FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK KTLPPYRMSS ASSKAEKEYI
721 QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR
781 VNHDDSEEEK LPTRSSSRIQ ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN
841 AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901 PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
//