LOCUS AEC06903.1 328 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana N-MYC downregulated-like 3 protein.
ACCESSION CP002685-2054
PROTEIN_ID AEC06903.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="NDL3"
/locus_tag="AT2G19620"
/gene_synonym="F3P11.22"
/gene_synonym="F3P11_22"
/gene_synonym="N-MYC downregulated-like 3"
/inference="Similar to RNA sequence,
EST:INSD:DR286472.1,INSD:EG418224.1,INSD:ES136700.1,
INSD:EG427902.1,INSD:EG433567.1,INSD:EG418223.1,
INSD:EG428505.1,INSD:EG418225.1,INSD:EG433634.1,
INSD:EG433566.1,INSD:EG424025.1,INSD:EG418222.1,
INSD:AV555504.1,INSD:EG427904.1,INSD:EG428515.1,
INSD:EG433561.1,INSD:EG428514.1,INSD:EG428501.1,
INSD:CF773144.1,INSD:EG418226.1,INSD:ES077229.1,
INSD:EG433565.1,INSD:EG424046.1,INSD:EG418230.1,
INSD:EG424034.1,INSD:BP592277.1,INSD:ES203331.1,
INSD:EL105988.1,INSD:EG427903.1,INSD:EG424036.1,
INSD:EG433564.1,INSD:EG424043.1,INSD:EG424044.1,
INSD:EG418228.1,INSD:EG424029.1,INSD:EG418227.1,
INSD:EG428502.1,INSD:EG424039.1,INSD:EG427906.1,
INSD:ES194141.1,INSD:EG424037.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819482.1,INSD:BX819517.1"
/note="N-MYC downregulated-like 3 (NDL3); CONTAINS
InterPro DOMAIN/s: Pollen specific protein SF21
(InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST
Arabidopsis thaliana protein match is: N-MYC
downregulated-like 1 (TAIR:AT5G56750.1); Has 904 Blast
hits to 903 proteins in 145 species: Archae - 0; Bacteria
- 134; Metazoa - 564; Fungi - 0; Plants - 129; Viruses -
0; Other Eukaryotes - 77 (source: NCBI BLink)."
/db_xref="Araport:AT2G19620"
/db_xref="TAIR:AT2G19620"
intron_pos 2:0 (1/9)
intron_pos 35:1 (2/9)
intron_pos 68:0 (3/9)
intron_pos 97:2 (4/9)
intron_pos 118:0 (5/9)
intron_pos 147:0 (6/9)
intron_pos 173:0 (7/9)
intron_pos 192:0 (8/9)
intron_pos 256:0 (9/9)
BEGIN
1 MEHHVKTCHG SVSVVVYGDQ EKPALITYPD VALNYMSCFQ GLFLCPEAVS LLLHNFCIYH
61 ISPPGHEFGA APVCSNDPSP SVEDLADQIL EVLNFFSLEA VMCMGITAGA YILSLFAIKH
121 KERVLGLILI SPLCKAPSWS EWFYYKVVSN LLYYYGMSGL LKDIFLQRYF SKEARGSSEV
181 PERDVVHECR RLLGERHGSS LMRFLEAVNR RHDLTDGLKS LKCRTLIFVG DQSPFHSETL
241 HMVTALDRKY SALVEVQACG SMVTEEQPHA MLIPMEFFFM GFGLYRPGRV SDSPRSPLSP
301 SCISPELLSP ESLGLKLKPI KTRVPTKC
//