LOCUS AEC06902.1 347 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana N-MYC downregulated-like 3 protein.
ACCESSION CP002685-2053
PROTEIN_ID AEC06902.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="NDL3"
/locus_tag="AT2G19620"
/gene_synonym="F3P11.22"
/gene_synonym="F3P11_22"
/gene_synonym="N-MYC downregulated-like 3"
/inference="Similar to RNA sequence,
EST:INSD:DR259861.1,INSD:EG427902.1,INSD:EG418223.1,
INSD:EG428505.1,INSD:DR259862.1,INSD:DR259860.1,
INSD:DR374094.1,INSD:DR259859.1,INSD:DR259852.1,
INSD:DR259853.1,INSD:EG433565.1,INSD:EG424046.1,
INSD:DR259858.1,INSD:EG418230.1,INSD:EG424036.1,
INSD:EG433564.1,INSD:EG424043.1,INSD:EG424044.1,
INSD:EG418227.1,INSD:EG424037.1,INSD:ES194141.1,
INSD:DR259850.1,INSD:EG418224.1,INSD:ES136700.1,
INSD:DR259854.1,INSD:EG433567.1,INSD:EG418225.1,
INSD:EG433634.1,INSD:EG433566.1,INSD:EG418222.1,
INSD:EG424025.1,INSD:AV555504.1,INSD:EG427904.1,
INSD:DR259855.1,INSD:DR259857.1,INSD:EG428515.1,
INSD:DR259851.1,INSD:EG433561.1,INSD:DR259849.1,
INSD:EG428514.1,INSD:EG428501.1,INSD:DR259856.1,
INSD:CF773144.1,INSD:EG418226.1,INSD:ES077229.1,
INSD:EG424034.1,INSD:BP592277.1,INSD:ES203331.1,
INSD:EG427903.1,INSD:EL105988.1,INSD:EG424029.1,
INSD:EG418228.1,INSD:EG428502.1,INSD:EG427906.1,
INSD:EG424039.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819482.1,INSD:BX819517.1"
/note="N-MYC downregulated-like 3 (NDL3); CONTAINS
InterPro DOMAIN/s: Pollen specific protein SF21
(InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST
Arabidopsis thaliana protein match is: N-MYC
downregulated-like 1 (TAIR:AT5G56750.1); Has 904 Blast
hits to 903 proteins in 145 species: Archae - 0; Bacteria
- 134; Metazoa - 564; Fungi - 0; Plants - 129; Viruses -
0; Other Eukaryotes - 77 (source: NCBI BLink)."
/db_xref="Araport:AT2G19620"
/db_xref="TAIR:AT2G19620"
intron_pos 21:0 (1/9)
intron_pos 54:1 (2/9)
intron_pos 87:0 (3/9)
intron_pos 116:2 (4/9)
intron_pos 137:0 (5/9)
intron_pos 166:0 (6/9)
intron_pos 192:0 (7/9)
intron_pos 211:0 (8/9)
intron_pos 275:0 (9/9)
BEGIN
1 MVGLNNAVSL DIEEICNGGK EHHVKTCHGS VSVVVYGDQE KPALITYPDV ALNYMSCFQG
61 LFLCPEAVSL LLHNFCIYHI SPPGHEFGAA PVCSNDPSPS VEDLADQILE VLNFFSLEAV
121 MCMGITAGAY ILSLFAIKHK ERVLGLILIS PLCKAPSWSE WFYYKVVSNL LYYYGMSGLL
181 KDIFLQRYFS KEARGSSEVP ERDVVHECRR LLGERHGSSL MRFLEAVNRR HDLTDGLKSL
241 KCRTLIFVGD QSPFHSETLH MVTALDRKYS ALVEVQACGS MVTEEQPHAM LIPMEFFFMG
301 FGLYRPGRVS DSPRSPLSPS CISPELLSPE SLGLKLKPIK TRVPTKC
//