LOCUS AEC06900.1 397 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002685-2052
PROTEIN_ID AEC06900.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G19610"
/gene_synonym="F3P11.21"
/gene_synonym="F3P11_21"
/inference="Similar to RNA sequence,
EST:INSD:EG427865.1,INSD:EG427862.1,INSD:EG427902.1,
INSD:EG424032.1,INSD:EG418223.1,INSD:EG428505.1,
INSD:EG427866.1,INSD:EG424048.1,INSD:AV555504.1,
INSD:EG427868.1,INSD:EG433563.1,INSD:EG427880.1,
INSD:EG427553.1,INSD:EG427864.1,INSD:EG427582.1,
INSD:EG433635.1,INSD:ES077229.1,INSD:EG424047.1,
INSD:EG447899.1,INSD:BP592277.1,INSD:EG427903.1,
INSD:EG427867.1,INSD:EG433631.1,INSD:EG447900.1,
INSD:EG424043.1,INSD:EG433628.1,INSD:EG433630.1,
INSD:EG424044.1,INSD:EG427897.1"
/inference="similar to RNA sequence, mRNA:INSD:AY231420.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; EXPRESSED IN: leaf whorl, cotyledon, flower;
EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s:
Zinc finger, RING-type, conserved site
(InterPro:IPR017907), Zinc finger, C6HC-type
(InterPro:IPR002867), Zinc finger, RING-type
(InterPro:IPR001841); BEST Arabidopsis thaliana protein
match is: RING/U-box superfamily protein
(TAIR:AT5G07640.1); Has 2064 Blast hits to 2058 proteins
in 184 species: Archae - 0; Bacteria - 0; Metazoa - 906;
Fungi - 405; Plants - 458; Viruses - 0; Other Eukaryotes -
295 (source: NCBI BLink)."
/db_xref="Araport:AT2G19610"
/db_xref="TAIR:AT2G19610"
intron_pos 137:0 (1/1)
BEGIN
1 MDNHLELAIK DAITADDLKR VDQETQHPLL AQELDLDSLE NPPRATTHTY RLYSKGLVSE
61 ELIKDDTMLV VGLGLSLCDS HDYTKQEINK ALRNQKLAAH PEAAELAAII HGLKWALELG
121 IERIQFFCDD SNILAYVTRK AAPNESIVAK LLEHVSLLQT RFTSCQALAT VSRDDIVSVI
181 KLAKDAIASQ TRWCEGDTEY ESCPVCYAYV SPNDKFEVQG CFHRICVTCM RKPFSSEQIL
241 RGNTAICPYP DCENDLVPED CRAFADADAI TLMIQRKKEK AIPVKDRVYC PNPSCSFLMS
301 DLDLIRHISK NPRHSEEARK CMECGLSFCK KCHVPWHYKK TCDEFKKSES YLKSDAAILE
361 SFVKTQGWKK CSQCQSIVQH GGGCQQMTCR YWTFVIY
//