LOCUS AEC06891.1 507 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin family protein / WD-40
repeat family protein protein.
ACCESSION CP002685-2040
PROTEIN_ID AEC06891.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="FVE"
/locus_tag="AT2G19520"
/gene_synonym="ACG1"
/gene_synonym="ATMSI4"
/gene_synonym="F3P11.12"
/gene_synonym="F3P11_12"
/gene_synonym="MSI4"
/gene_synonym="MULTICOPY SUPPRESSOR OF IRA1 4"
/gene_synonym="NFC04"
/gene_synonym="NFC4"
/gene_synonym="NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP
C"
/gene_synonym="WD-40 REPEAT PROTEIN MSI4"
/inference="Similar to RNA sequence,
EST:INSD:ES119809.1,INSD:ES042177.1,INSD:EL989053.1,
INSD:EL193495.1,INSD:ES103068.1,INSD:ES111107.1,
INSD:BP779229.1,INSD:ES117149.1,INSD:AV829490.1,
INSD:EL243621.1,INSD:ES070954.1,INSD:EH900634.1,
INSD:EL069225.1,INSD:BP591410.1,INSD:AV814012.1,
INSD:DR375077.1,INSD:EH810826.1,INSD:EL160489.1,
INSD:EH832170.1,INSD:ES082620.1,INSD:AV782310.1,
INSD:EL131451.1,INSD:EH877190.1,INSD:EL197118.1,
INSD:ES104355.1,INSD:EH987144.1,INSD:EL308406.1,
INSD:Z37287.1,INSD:EL051626.1,INSD:EL165897.1,
INSD:EH868150.1,INSD:CA782015.1,INSD:BP594174.1,
INSD:AI099809.1,INSD:BP664073.1,INSD:BX835142.1,
INSD:EH948707.1,INSD:CB260494.1,INSD:ES201324.1,
INSD:EL055375.1,INSD:EG529076.1,INSD:BP633202.1,
INSD:AV803783.1,INSD:ES145855.1,INSD:EL992332.1,
INSD:ES058261.1,INSD:ES045114.1,INSD:BP587166.1,
INSD:EL247324.1,INSD:BP670860.1,INSD:EH884118.1,
INSD:DR283725.1,INSD:ES188954.1,INSD:ES069420.1,
INSD:DR283727.1,INSD:EL110719.1,INSD:BP591442.1,
INSD:DR283726.1,INSD:DR749982.1,INSD:ES135137.1,
INSD:ES055550.1,INSD:EL071287.1,INSD:Z37286.1,
INSD:ES196682.1,INSD:CB252126.1,INSD:EH957032.1,
INSD:ES009695.1,INSD:DR749981.1,INSD:EL292617.1,
INSD:ES017921.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY059799.1,INSD:AF028711.1,INSD:AF498102.1,
INSD:AY081447.1,INSD:AY057655.1"
/note="FVE; FUNCTIONS IN: metal ion binding; INVOLVED IN:
flower development, unidimensional cell growth, trichome
morphogenesis, leaf morphogenesis; LOCATED IN: nucleolus,
nucleus, CUL4 RING ubiquitin ligase complex, cytoplasm;
EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s:
Histone-binding protein RBBP4 (InterPro:IPR022052), WD40
repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing
domain (InterPro:IPR011046), WD40-repeat-containing domain
(InterPro:IPR017986), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: nucleosome/chromatin assembly factor group C5
(TAIR:AT4G29730.1); Has 27643 Blast hits to 19007 proteins
in 669 species: Archae - 18; Bacteria - 3366; Metazoa -
11144; Fungi - 6221; Plants - 3473; Viruses - 0; Other
Eukaryotes - 3421 (source: NCBI BLink)."
/db_xref="Araport:AT2G19520"
/db_xref="TAIR:AT2G19520"
intron_pos 95:2 (1/14)
intron_pos 117:0 (2/14)
intron_pos 146:0 (3/14)
intron_pos 167:0 (4/14)
intron_pos 189:0 (5/14)
intron_pos 214:0 (6/14)
intron_pos 239:1 (7/14)
intron_pos 304:2 (8/14)
intron_pos 332:0 (9/14)
intron_pos 356:2 (10/14)
intron_pos 394:0 (11/14)
intron_pos 419:0 (12/14)
intron_pos 441:2 (13/14)
intron_pos 475:0 (14/14)
BEGIN
1 MESDEAAAVS PQATTPSGGT GASGPKKRGR KPKTKEDSQT PSSQQQSDVK MKESGKKTQQ
61 SPSVDEKYSQ WKGLVPILYD WLANHNLVWP SLSCRWGPQL EQATYKNRQR LYLSEQTDGS
121 VPNTLVIANC EVVKPRVAAA EHISQFNEEA RSPFVKKYKT IIHPGEVNRI RELPQNSKIV
181 ATHTDSPDVL IWDVETQPNR HAVLGAANSR PDLILTGHQD NAEFALAMCP TEPFVLSGGK
241 DKSVVLWSIQ DHITTIGTDS KSSGSIIKQT GEGTDKNESP TVGPRGVYHG HEDTVEDVAF
301 SPTSAQEFCS VGDDSCLILW DARTGTNPVT KVEKAHDADL HCVDWNPHDD NLILTGSADN
361 TVRLFDRRKL TANGVGSPIY KFEGHKAAVL CVQWSPDKSS VFGSSAEDGL LNIWDYDRVS
421 KKSDRAAKSP AGLFFQHAGH RDKVVDFHWN ASDPWTIVSV SDDCETTGGG GTLQIWRMSD
481 LIYRPEEEVV AELEKFKSHV MTCASKP
//