LOCUS AEC06880.1 367 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DWD (DDB1-binding WD40 protein) hypersensitive
to ABA 1 protein.
ACCESSION CP002685-2027
PROTEIN_ID AEC06880.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="DWA1"
/locus_tag="AT2G19430"
/gene_synonym="AtTHO6"
/gene_synonym="DWD (DDB1-binding WD40 protein)
hypersensitive to ABA 1"
/gene_synonym="F27F23.25"
/gene_synonym="THO6"
/inference="Similar to RNA sequence,
EST:INSD:BP862728.1,INSD:EH943328.1,INSD:BP628576.1,
INSD:BP828030.1,INSD:BP562410.2,INSD:AV813914.1,
INSD:CF773879.1,INSD:DR381785.1,INSD:DR349760.1,
INSD:BP626687.1,INSD:EH986475.1,INSD:BP812433.1,
INSD:DR349762.1,INSD:EH837458.1,INSD:ES191319.1,
INSD:DR349761.1,INSD:EH951605.1,INSD:BP624970.1,
INSD:BP840192.1,INSD:BP829801.1,INSD:EG471710.1,
INSD:BP650828.1,INSD:BP797653.1,INSD:ES079154.1,
INSD:EH944966.1,INSD:EG471721.1,INSD:EH908360.1,
INSD:EH845163.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY099718.1,INSD:BX819216.1,INSD:BX818842.1,
INSD:AY128879.1"
/note="DWD (DDB1-binding WD40 protein) hypersensitive to
ABA 1 (DWA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2
(InterPro:IPR019782), WD40 repeat-like-containing domain
(InterPro:IPR011046), WD40 repeat, conserved site
(InterPro:IPR019775), WD40-repeat-containing domain
(InterPro:IPR017986), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Transducin/WD40 repeat-like superfamily protein
(TAIR:AT3G49660.1); Has 25005 Blast hits to 14147 proteins
in 619 species: Archae - 64; Bacteria - 4449; Metazoa -
9459; Fungi - 5655; Plants - 2500; Viruses - 0; Other
Eukaryotes - 2878 (source: NCBI BLink)."
/db_xref="Araport:AT2G19430"
/db_xref="TAIR:AT2G19430"
intron_pos 109:2 (1/10)
intron_pos 135:1 (2/10)
intron_pos 150:2 (3/10)
intron_pos 171:0 (4/10)
intron_pos 189:0 (5/10)
intron_pos 216:0 (6/10)
intron_pos 229:1 (7/10)
intron_pos 263:0 (8/10)
intron_pos 300:0 (9/10)
intron_pos 339:0 (10/10)
BEGIN
1 MYGDATNWNE DEYRESILKE REIETRTVFR TAWAPPARIS NPDAFVVASS DGTLAFHSLN
61 SLVSQSASFG YSKGQDVMVA EPERVVRAHE GPAYDVKFYG EDEDALLLSC GDDGRVRGWK
121 WREFAESDVS LHLKENHLKP LLELINPQHK GPWGALSPMP EINAMSVDPQ SGSVFTAAGD
181 SCAYCWDVES GKIKMTFKGH SDYLHTVVSR SSASQILTGS EDGTARIWDC KTGKCVKVIG
241 SQDKKSRLRV SSMALDGSES WLVCGQGKNL ALWNLPASEC VQTIPIPAHV QDVMFDEKQI
301 LTVGAEPLLR RFDLNGALLS QIHCAPCSVF SISLHPAGVV AVGGYGGIVD VISQFGSHLC
361 TFRSSSL
//