LOCUS AEC06875.1 275 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc ion binding protein protein.
ACCESSION CP002685-2019
PROTEIN_ID AEC06875.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G19385"
/inference="Similar to RNA sequence,
EST:INSD:EL014622.1,INSD:ES193315.1,INSD:ES115760.1,
INSD:DR279945.1,INSD:ES156705.1,INSD:ES088568.1,
INSD:ES151000.1,INSD:DR279942.1,INSD:DR379799.1,
INSD:DR279941.1,INSD:DR279944.1,INSD:DR279943.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY084679.1,INSD:BT024496.1,INSD:BX819376.1"
/note="zinc ion binding; FUNCTIONS IN: zinc ion binding;
INVOLVED IN: biological_process unknown; LOCATED IN:
intracellular; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880),
Zinc finger, C2H2, LYAR-type (InterPro:IPR014898); BEST
Arabidopsis thaliana protein match is: RNA recognition
motif (RRM)-containing protein (TAIR:AT2G19380.1); Has 578
Blast hits to 525 proteins in 182 species: Archae - 0;
Bacteria - 8; Metazoa - 240; Fungi - 111; Plants - 79;
Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink)."
/db_xref="Araport:AT2G19385"
/db_xref="TAIR:AT2G19385"
intron_pos 30:0 (1/5)
intron_pos 55:0 (2/5)
intron_pos 98:2 (3/5)
intron_pos 220:0 (4/5)
intron_pos 256:0 (5/5)
BEGIN
1 MVWFQCEDCG ESLKKPKVPS HFKMCRANKL SCIDCGEMFG RDTVQGHNQC ITEAEKYGPK
61 GQSKSANGTP AKPKDISKQE PDFDINVGLS NRYPWFCSLC NTKATSQQTL LAHADGKKHR
121 GKAKAFHARQ QQEQSTTLDN KDGSENASNV DSEQKKVDLP ASSGVANGES HPEKKRKLET
181 LDETSEGEEA KGSDLKKAKK QDHEKKINWK KLITSALKSN EDKTLKMKKL KKLVLESIVD
241 SGRDKSELKA ELELKVNLSS RFTVDGKYVK LVAKD
//