LOCUS       AEC06873.1               426 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana tRNA-splicing ligase, putative (DUF239)
            protein.
ACCESSION   CP002685-2016
PROTEIN_ID  AEC06873.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G19360"
                     /gene_synonym="F27F23.16"
                     /gene_synonym="F27F23_16"
                     /note="Protein of Unknown Function (DUF239); FUNCTIONS IN:
                     molecular_function unknown; INVOLVED IN:
                     biological_process unknown; LOCATED IN: endomembrane
                     system; CONTAINS InterPro DOMAIN/s: Protein of unknown
                     function DUF239, plant (InterPro:IPR004314); BEST
                     Arabidopsis thaliana protein match is: NEP-interacting
                     protein 1 (TAIR:AT2G17750.1); Has 35333 Blast hits to
                     34131 proteins in 2444 species: Archae - 798; Bacteria -
                     22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
                     0; Other Eukaryotes - 9610 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G19360"
                     /db_xref="TAIR:AT2G19360"
     intron_pos      52:0 (1/7)
     intron_pos      81:0 (2/7)
     intron_pos      162:0 (3/7)
     intron_pos      211:1 (4/7)
     intron_pos      235:0 (5/7)
     intron_pos      253:0 (6/7)
     intron_pos      302:0 (7/7)
BEGIN
        1 MIGRIMANLI VLYILVIEAM IVIGSESSDS RDAEINRLLK KLNKPFLKSI KSPDGDIIDC
       61 VHMKNHPIYD HPLFKNHTIQ MRPTSYPEGW SNKDSDNEKH KMVPQLWTIN GKCPKNSIPI
      121 RRTRKEDILR AKSIERFGKK DPNNIHQHKP TNPTNNDGTH EYAILKVGEN SPRAKFYGTQ
      181 TLINVWKPFV QHRNEFSLSQ IWMSAGSYRP YGSSKWTNKQ DHSTQLETIE AGWQVCTVLY
      241 NDTNPRYFVY WTNDSYTQHG CYNNLCSGFV VVNQAFALGA AVPEVSIRDG LQYEIFTSIW
      301 KDRSSGNWWL KFGTHLIVGY WPSSLFNRLG DAASQVHWGG EIVNVKENNQ HTSTQMGSGS
      361 FAINGFRKAS YFRNILVLDE NNTTKQPVGA STSETEGSCY DIRYRTDQAW GSFFYYGGPG
      421 RSPFCA
//