LOCUS AEC06872.1 103 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transmembrane protein (DUF872) protein.
ACCESSION CP002685-2015
PROTEIN_ID AEC06872.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G19350"
/gene_synonym="F27F23.15"
/gene_synonym="F27F23_15"
/inference="Similar to RNA sequence,
EST:INSD:DR197867.1,INSD:AU236836.1,INSD:AU227836.1,
INSD:DR376061.1,INSD:DR197865.1,INSD:ES209868.1,
INSD:BP808279.1,INSD:AI992581.1,INSD:ES199083.1,
INSD:AA042729.1,INSD:DR197866.1,INSD:EH941951.1,
INSD:EL302909.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY087699.1,INSD:BX821338.1,INSD:BT005072.1,
INSD:BX821405.1,INSD:BT003966.1"
/note="Eukaryotic protein of unknown function (DUF872);
CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0414, transmembrane (InterPro:IPR008590); BEST
Arabidopsis thaliana protein match is: Eukaryotic protein
of unknown function (DUF872) (TAIR:AT4G29850.1); Has 270
Blast hits to 270 proteins in 73 species: Archae - 0;
Bacteria - 0; Metazoa - 166; Fungi - 0; Plants - 98;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink)."
/db_xref="Araport:AT2G19350"
/db_xref="TAIR:AT2G19350"
intron_pos 64:1 (1/1)
BEGIN
1 MAYVDHAFSI SDEDLMIGTS YTVSNRPPVK EISLAVGLLV FGTLGIVLGF FMAYNRVGGD
61 RGHGIFFIVL GCLLFIPGFY YTRIAYYAYK GYKGFSFSNI PSV
//