LOCUS AEC06863.1 693 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002685-2006
PROTEIN_ID AEC06863.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G19280"
/gene_synonym="F27F23.8"
/gene_synonym="F27F23_8"
/inference="Similar to RNA sequence,
EST:INSD:BP811210.1,INSD:BP601267.1,INSD:ES079709.1,
INSD:EL125793.1,INSD:AU238132.1,INSD:AU229269.1,
INSD:EG478622.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK229469.1,INSD:AK221302.1,INSD:BT012576.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT2G02150.1); Has 48105 Blast hits to 13725
proteins in 297 species: Archae - 3; Bacteria - 51;
Metazoa - 644; Fungi - 771; Plants - 45193; Viruses - 0;
Other Eukaryotes - 1443 (source: NCBI BLink)."
/db_xref="Araport:AT2G19280"
/db_xref="TAIR:AT2G19280"
BEGIN
1 MWVSIFNLKS SGLNHFCTRT KAFRYFWCRT FSLASLSENN SRFQTDSSRL PYSGSRYYHS
61 SSKHFGEDFV SILKNIDVPR DCVETIRNVL VKHNWIQKYE SGFSTELDQY TVIRILDDLF
121 EETLDASIVL YFFRWSELWI GVEHSSRSIS RMIHILVSGN MNYRAVDMLL CLVKKCSGEE
181 RSLCLVMKDL FETRIDRRVL ETVFSILIDC CIRERKVNMA LKLTYKVDQF GIFPSRGVCI
241 SLLKEILRVH GLELAREFVE HMLSRGRHLN AAVLSLFIRK YCSDGYFDKG WELLMGMKHY
301 GIRPDIVAFT VFIDKLCKAG FLKEATSVLF KLKLFGISQD SVSVSSVIDG FCKVGKPEEA
361 IKLIHSFRLR PNIFVYSSFL SNICSTGDML RASTIFQEIF ELGLLPDCVC YTTMIDGYCN
421 LGRTDKAFQY FGALLKSGNP PSLTTSTILI GACSRFGSIS DAESVFRNMK TEGLKLDVVT
481 YNNLMHGYGK THQLNKVFEL IDEMRSAGIS PDVATYNILI HSMVVRGYID EANEIISELI
541 RRGFVPSTLA FTDVIGGFSK RGDFQEAFIL WFYMADLRMK PDVVTCSALL HGYCKAQRME
601 KAIVLFNKLL DAGLKPDVVL YNTLIHGYCS VGDIEKACEL IGLMVQRGML PNESTHHALV
661 LGLEGKRFVN SETHASMLLE EIIVAKWHLT SGG
//