LOCUS AEC06860.1 840 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ypt/Rab-GAP domain of gyp1p superfamily
protein protein.
ACCESSION CP002685-1999
PROTEIN_ID AEC06860.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G19240"
/gene_synonym="F27F23.4"
/gene_synonym="F27F23_4"
/note="Ypt/Rab-GAP domain of gyp1p superfamily protein;
FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN:
regulation of Rab GTPase activity; LOCATED IN:
intracellular, chloroplast; CONTAINS InterPro DOMAIN/s:
RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana
protein match is: Ypt/Rab-GAP domain of gyp1p superfamily
protein (TAIR:AT4G29950.1); Has 1541 Blast hits to 1252
proteins in 224 species: Archae - 0; Bacteria - 17;
Metazoa - 583; Fungi - 285; Plants - 264; Viruses - 0;
Other Eukaryotes - 392 (source: NCBI BLink)."
/db_xref="Araport:AT2G19240"
/db_xref="TAIR:AT2G19240"
intron_pos 61:2 (1/4)
intron_pos 91:1 (2/4)
intron_pos 150:1 (3/4)
intron_pos 790:0 (4/4)
BEGIN
1 MAPSEIEPAL QEPSGSLVLS REDRRFANLR GVRWRVNLGV LPSLASSIDE FRRAAANSRR
61 RRRLLMDPHV LKHEDSSPNF IIDNPLSQNP NSTWGQFFRN AELEKTLDQD LSRLYPEHWC
121 YFQTPRYQGM LRRILLLWCL KHPEYGYRQG MHELLAPLLY VLHVDIMRLS EVRKSYEDYF
181 TDRFDSLSFM ERDITYTFDF NKFMDSVDNG IGSQGHSKNF NSLDELDPEV QSLVMLTDSY
241 GTESELGIVL SEKFMEHDAY CMFDALMSGI HGCFAMASFF SYSPASGSHT GLTPVLEACS
301 AFYRILAVVD SSLHSHLVEL GVEPQYFGLR WLRVLFGREF LLQDLLLVWD EIILADNSAR
361 TDEDSRNQNF RIFDCPRGTL VLGMTVSMIL YLRSSLLSTE NATCCLQRLL NFPENIDLNK
421 IIQKAKLLQA LVLDTDMLSA LSINGVFDQS NFVPARTKSC STSPRSPLII APESYWEKKW
481 RVLHKAEEEE NKICLEKQTP PTQKKKRWLN VTKLFRAVID LSHHKLGIGE RKANSSPVTQ
541 SLLEDSSEQL NVDCHVTVNK ENIHPQETEE NIMEFHSADE ESIVSGSSPS EESSFVSLDP
601 TSPVRCSTKI ENDSVSSAGS NLLPDEDDKS IVSISEENSS VSSDPISPAI DSNYSGKYLD
661 CCTGSENDKD QQTSVNSPLS VSPHRRNEYP VTQSDEDVST DKSVGITKEY KLLHGIVQWF
721 RKLKRTLSSE ETSHRKASDA TKTNDVKIKK NQIGCYSESH PQALSSGDSS QNLRKTLKNL
781 GQSMLKHIEA IELVFQQEPC LVPAGLIGNL AKTNLIEKGQ VTATTALKEL RKLSNLLSEM
//