LOCUS AEC06831.1 393 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana homogentisate phytyltransferase 1 protein.
ACCESSION CP002685-1957
PROTEIN_ID AEC06831.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="HPT1"
/locus_tag="AT2G18950"
/gene_synonym="ATHPT"
/gene_synonym="F19F24.15"
/gene_synonym="F19F24_15"
/gene_synonym="HOMOGENTISATE PHYTYLTRANSFERASE"
/gene_synonym="homogentisate phytyltransferase 1"
/gene_synonym="TOCOPHEROL PHYTYLTRANSFERASE"
/gene_synonym="TOCOPHEROL POLYPRENYLTRANSFERASE"
/gene_synonym="TPT1"
/gene_synonym="VITAMIN E 2"
/gene_synonym="VTE2"
/inference="Similar to RNA sequence,
EST:INSD:EL042441.1,INSD:EL303497.1,INSD:CF651662.1,
INSD:ES172028.1,INSD:EL996874.1,INSD:ES089322.1,
INSD:EL109308.1,INSD:EG472126.1,INSD:DR368307.1,
INSD:BP668339.1,INSD:EH894237.1,INSD:ES042984.1,
INSD:EL096390.1,INSD:EG472122.1,INSD:ES001091.1,
INSD:EL160884.1,INSD:EL302637.1,INSD:ES031623.1,
INSD:DR368308.1,INSD:ES005013.1,INSD:EG472128.1,
INSD:AV828049.1,INSD:EL979956.1,INSD:EG472121.1,
INSD:EL143667.1,INSD:BP862240.1,INSD:BP815254.1,
INSD:DR384191.1,INSD:BP619154.1,INSD:EH941295.1,
INSD:AV800252.1,INSD:EL183363.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821798.1,INSD:AF324344.1,INSD:BX819762.1,
INSD:AY089963.1,INSD:BX819968.1,INSD:AY063893.1,
INSD:BX819447.1,INSD:AY113993.1"
/note="homogentisate phytyltransferase 1 (HPT1); CONTAINS
InterPro DOMAIN/s: UbiA prenyltransferase
(InterPro:IPR000537); BEST Arabidopsis thaliana protein
match is: homogentisate prenyltransferase
(TAIR:AT3G11945.1); Has 1047 Blast hits to 1044 proteins
in 315 species: Archae - 194; Bacteria - 477; Metazoa - 7;
Fungi - 6; Plants - 190; Viruses - 0; Other Eukaryotes -
173 (source: NCBI BLink)."
/db_xref="Araport:AT2G18950"
/db_xref="TAIR:AT2G18950"
intron_pos 14:1 (1/12)
intron_pos 31:1 (2/12)
intron_pos 113:0 (3/12)
intron_pos 141:0 (4/12)
intron_pos 166:0 (5/12)
intron_pos 194:0 (6/12)
intron_pos 224:0 (7/12)
intron_pos 258:0 (8/12)
intron_pos 290:0 (9/12)
intron_pos 314:0 (10/12)
intron_pos 346:0 (11/12)
intron_pos 381:0 (12/12)
BEGIN
1 MESLLSSSSL VSAAGGFCWK KQNLKLHSLS EIRVLRCDSS KVVAKPKFRN NLVRPDGQGS
61 SLLLYPKHKS RFRVNATAGQ PEAFDSNSKQ KSFRDSLDAF YRFSRPHTVI GTVLSILSVS
121 FLAVEKVSDI SPLLFTGILE AVVAALMMNI YIVGLNQLSD VEIDKVNKPY LPLASGEYSV
181 NTGIAIVASF SIMSFWLGWI VGSWPLFWAL FVSFMLGTAY SINLPLLRWK RFALVAAMCI
241 LAVRAIIVQI AFYLHIQTHV FGRPILFTRP LIFATAFMSF FSVVIALFKD IPDIEGDKIF
301 GIRSFSVTLG QKRVFWTCVT LLQMAYAVAI LVGATSPFIW SKVISVVGHV ILATTLWARA
361 KSVDLSSKTE ITSCYMFIWK LFYAEYLLLP FLK
//