LOCUS AEC06830.1 822 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-1956
PROTEIN_ID AEC06830.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G18940"
/gene_synonym="F19F24.14"
/gene_synonym="F19F24_14"
/inference="Similar to RNA sequence,
EST:INSD:EL304876.1,INSD:EG481288.1,INSD:ES076351.1,
INSD:EG481290.1,INSD:AV827810.1,INSD:BP795541.1,
INSD:BP789634.1,INSD:EH851935.1,INSD:BP787300.1,
INSD:EG478520.1,INSD:ES110908.1,INSD:ES194727.1,
INSD:AV799488.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT010749.1,INSD:AY056798.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; INVOLVED IN: biological_process unknown; LOCATED
IN: chloroplast; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 11 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G02860.1); Has 70772 Blast hits to 15680 proteins
in 317 species: Archae - 4; Bacteria - 89; Metazoa - 1190;
Fungi - 1125; Plants - 65689; Viruses - 0; Other
Eukaryotes - 2675 (source: NCBI BLink)."
/db_xref="Araport:AT2G18940"
/db_xref="TAIR:AT2G18940"
BEGIN
1 MDGALFPHKP PYPIQSKRPP PSQSSNQSIK FSSATLHLPP PSPPSFPLDS LLHHLVHLSS
61 PPPRHSNSAA ARFPSLEVST DSSSSKPILG IEIENERNGS LKLLCKKEVV LVNSIVEQPL
121 TGLSRFFDSV KSELLRTDLV SLVKGLDDSG HWERAVFLFE WLVLSSNSGA LKLDHQVIEI
181 FVRILGRESQ YSVAAKLLDK IPLQEYLLDV RAYTTILHAY SRTGKYEKAI DLFERMKEMG
241 PSPTLVTYNV ILDVFGKMGR SWRKILGVLD EMRSKGLKFD EFTCSTVLSA CAREGLLREA
301 KEFFAELKSC GYEPGTVTYN ALLQVFGKAG VYTEALSVLK EMEENSCPAD SVTYNELVAA
361 YVRAGFSKEA AGVIEMMTKK GVMPNAITYT TVIDAYGKAG KEDEALKLFY SMKEAGCVPN
421 TCTYNAVLSL LGKKSRSNEM IKMLCDMKSN GCSPNRATWN TMLALCGNKG MDKFVNRVFR
481 EMKSCGFEPD RDTFNTLISA YGRCGSEVDA SKMYGEMTRA GFNACVTTYN ALLNALARKG
541 DWRSGENVIS DMKSKGFKPT ETSYSLMLQC YAKGGNYLGI ERIENRIKEG QIFPSWMLLR
601 TLLLANFKCR ALAGSERAFT LFKKHGYKPD MVIFNSMLSI FTRNNMYDQA EGILESIRED
661 GLSPDLVTYN SLMDMYVRRG ECWKAEEILK TLEKSQLKPD LVSYNTVIKG FCRRGLMQEA
721 VRMLSEMTER GIRPCIFTYN TFVSGYTAMG MFAEIEDVIE CMAKNDCRPN ELTFKMVVDG
781 YCRAGKYSEA MDFVSKIKTF DPCFDDQSIQ RLALRVRENL ES
//