LOCUS AEC06806.1 260 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana P-loop containing nucleoside triphosphate
hydrolases superfamily protein protein.
ACCESSION CP002685-1930
PROTEIN_ID AEC06806.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G18770"
/gene_synonym="MSF3.15"
/gene_synonym="MSF3_15"
/inference="Similar to RNA sequence,
EST:INSD:EG430027.1,INSD:DR192852.1,INSD:ES151370.1,
INSD:ES174546.1,INSD:DR192860.1,INSD:ES116058.1,
INSD:BP782956.1,INSD:ES191513.1,INSD:DR192856.1,
INSD:EH969478.1,INSD:DR192858.1,INSD:EG430273.1,
INSD:DR192859.1,INSD:AU226699.1,INSD:DR192854.1,
INSD:DR192857.1,INSD:EG443944.1,INSD:EG430026.1,
INSD:EG425688.1,INSD:BP584500.1,INSD:ES166896.1,
INSD:EG423229.1,INSD:EG443945.1,INSD:EG425691.1,
INSD:EG419167.1,INSD:EG423222.1,INSD:EG423221.1,
INSD:ES200816.1,INSD:DR192855.1,INSD:BP802932.1,
INSD:EG430271.1,INSD:EG423223.1,INSD:EG425693.1,
INSD:EH914192.1,INSD:ES137627.1,INSD:EG423234.1,
INSD:ES157866.1,INSD:ES151709.1,INSD:EG447474.1,
INSD:EG423224.1,INSD:EG423220.1,INSD:AU235917.1,
INSD:EG443912.1,INSD:EG423227.1,INSD:DR192850.1,
INSD:ES210405.1,INSD:BP799182.1,INSD:EG423232.1,
INSD:EG447462.1,INSD:ES170004.1,INSD:EG443923.1,
INSD:BP798190.1,INSD:EG419169.1,INSD:EG443946.1,
INSD:EG430028.1,INSD:EG430030.1,INSD:EG425692.1,
INSD:DR192851.1,INSD:DR372213.1,INSD:DR192861.1,
INSD:EG419170.1,INSD:ES200100.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK228009.1,INSD:AY924743.1,INSD:AY085237.1,
INSD:AY735577.1,INSD:BX821965.1"
/note="P-loop containing nucleoside triphosphate
hydrolases superfamily protein; CONTAINS InterPro
DOMAIN/s: Signal recognition particle receptor, beta
subunit (InterPro:IPR019009); BEST Arabidopsis thaliana
protein match is: signal recognition particle binding
(TAIR:AT5G05670.1); Has 1043 Blast hits to 1043 proteins
in 279 species: Archae - 2; Bacteria - 132; Metazoa - 396;
Fungi - 167; Plants - 178; Viruses - 0; Other Eukaryotes -
168 (source: NCBI BLink)."
/db_xref="Araport:AT2G18770"
/db_xref="TAIR:AT2G18770"
intron_pos 47:1 (1/5)
intron_pos 75:0 (2/5)
intron_pos 105:0 (3/5)
intron_pos 154:2 (4/5)
intron_pos 198:2 (5/5)
BEGIN
1 MDNLEDLKIV AEQWSKQGLE FVQKIPPPQL YTAIGVLLLA TIWLLSIRLF RRTKSNTVLL
61 SGLSGSGKTV LFYQLRDGSS HQGAVTSMEP NEGTFVLHNE NNTKKGKVKP VHLIDVPGHS
121 RLISKLEEYL PRAAAVVFVV DALEFLPNIR AASEYLYDIL TNASVIKNKT PVLLCCNKTD
181 KVTAHTKEFI RKQMEKEIDK LRVSRSAIST ADIANDFTLG IEGEVFSFSH CHNKVTVAEA
241 SGLTGETDQV QEFIREHVKP
//