LOCUS AEC06801.1 78 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Small nuclear ribonucleoprotein family
protein protein.
ACCESSION CP002685-1918
PROTEIN_ID AEC06801.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G18740"
/gene_synonym="MSF3.12"
/gene_synonym="MSF3_12"
/inference="Similar to RNA sequence,
EST:INSD:ES109000.1,INSD:ES162372.1,INSD:EL990715.1,
INSD:EL976859.1,INSD:EH846411.1,INSD:ES139860.1,
INSD:EH946020.1,INSD:ES076986.1,INSD:DR313080.1,
INSD:ES106146.1,INSD:EL976918.1,INSD:EL290363.1,
INSD:EH846900.1,INSD:ES050897.1,INSD:EH853486.1,
INSD:ES106750.1,INSD:EL260330.1,INSD:ES064482.1,
INSD:DR313094.1,INSD:EL006364.1,INSD:ES119007.1,
INSD:EL051281.1,INSD:EG499152.1,INSD:EL042780.1,
INSD:EH937242.1,INSD:ES103249.1,INSD:EL084513.1,
INSD:ES131703.1,INSD:ES078493.1,INSD:EL297124.1,
INSD:ES083588.1,INSD:ES026592.1,INSD:ES167721.1,
INSD:EH990418.1"
/note="Small nuclear ribonucleoprotein family protein;
CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein
(LSM) domain (InterPro:IPR001163), Like-Sm
ribonucleoprotein (LSM)-related domain
(InterPro:IPR010920); BEST Arabidopsis thaliana protein
match is: Small nuclear ribonucleoprotein family protein
(TAIR:AT4G30330.1); Has 429 Blast hits to 429 proteins in
174 species: Archae - 0; Bacteria - 0; Metazoa - 172;
Fungi - 98; Plants - 81; Viruses - 0; Other Eukaryotes -
78 (source: NCBI BLink)."
/db_xref="Araport:AT2G18740"
/db_xref="TAIR:AT2G18740"
intron_pos 15:0 (1/4)
intron_pos 24:0 (2/4)
intron_pos 45:0 (3/4)
intron_pos 71:1 (4/4)
BEGIN
1 MASTKVQRIM TQPINLIFRF LQSKARIQIW LFEQKDLRIE GRITGFDEYM NLVLDEAEEV
61 SIKKNTRKPL GFYSKETT
//