LOCUS AEC06796.1 551 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SECY homolog 1 protein.
ACCESSION CP002685-1911
PROTEIN_ID AEC06796.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SCY1"
/locus_tag="AT2G18710"
/gene_synonym="SECY homolog 1"
/inference="Similar to RNA sequence,
EST:INSD:BP570330.1,INSD:EL067835.1,INSD:BP781565.1,
INSD:BP862342.1,INSD:ES091151.1,INSD:AV819384.1,
INSD:BP795357.1,INSD:CB259339.1,INSD:EL093455.1,
INSD:EL194843.1,INSD:EL261164.1,INSD:EH961929.1,
INSD:EH904342.1,INSD:H76064.1,INSD:BP788620.1,
INSD:AV822934.1,INSD:EH991212.1,INSD:DR256984.1,
INSD:EL304518.1,INSD:BP630333.1,INSD:EL202680.1,
INSD:EH918971.1,INSD:BP820932.1,INSD:EL269320.1,
INSD:ES080737.1,INSD:EL193841.1,INSD:EL233805.1,
INSD:BP565106.1,INSD:EL056553.1,INSD:EL302641.1,
INSD:EH918905.1,INSD:EH898884.1,INSD:EL015863.1,
INSD:DR256979.1,INSD:AA395168.1,INSD:DR256982.1,
INSD:EH854416.1,INSD:AV828656.1,INSD:EH800226.1,
INSD:EH819069.1,INSD:EL142589.1,INSD:EL221580.1,
INSD:EL002481.1,INSD:EL097677.1,INSD:EH820971.1,
INSD:AW004533.1,INSD:BP633742.1,INSD:EH824752.1,
INSD:BP627270.1,INSD:EH955616.1,INSD:EL075513.1,
INSD:BP666712.1,INSD:DR256980.1,INSD:ES165029.1,
INSD:EH898741.1,INSD:ES104393.1,INSD:EL111824.1,
INSD:AV786434.1,INSD:EL075139.1,INSD:EL143872.1,
INSD:EL288771.1,INSD:EH828713.1,INSD:ES111827.1,
INSD:BP573831.1,INSD:AV824659.1,INSD:EH926882.1,
INSD:T43603.1,INSD:EH887868.1,INSD:EL015604.1,
INSD:DR377810.1,INSD:DR256977.1,INSD:EH862132.1,
INSD:BP564977.1,INSD:ES215908.1,INSD:EH826569.1,
INSD:EH810742.1,INSD:AV787162.1,INSD:EH989882.1,
INSD:EL248418.1,INSD:EL308813.1,INSD:EH845409.1,
INSD:EL011616.1,INSD:BP851406.1,INSD:ES207950.1,
INSD:AV558775.1,INSD:EH937031.1,INSD:EL191580.1,
INSD:DR256981.1,INSD:BP566343.1,INSD:ES001768.1,
INSD:EH964416.1,INSD:AV802306.1,INSD:DR372724.1,
INSD:EH960132.1,INSD:EL283172.1,INSD:EL114537.1,
INSD:BP865211.1,INSD:T22875.1,INSD:EL073935.1,
INSD:EL105050.1,INSD:EL283421.1,INSD:BP583600.1,
INSD:BP567386.1,INSD:EH955392.1,INSD:DR256978.1,
INSD:EL024362.1,INSD:EH840769.1,INSD:EH858498.1,
INSD:BP850593.1,INSD:EL987604.1,INSD:AV795519.1,
INSD:EH915934.1,INSD:BP574062.1,INSD:EL018294.1,
INSD:BP668091.1,INSD:EL170564.1,INSD:EH979564.1,
INSD:EL070111.1,INSD:EH916473.1,INSD:EL220409.1,
INSD:EH890894.1,INSD:EH883896.1,INSD:BP863542.1,
INSD:EL129798.1,INSD:EL048953.1,INSD:EH897943.1,
INSD:EL314226.1,INSD:EH946555.1,INSD:EH871653.1,
INSD:EL191065.1,INSD:EL323856.1,INSD:EH949361.1,
INSD:EL317099.1,INSD:EL233524.1,INSD:EL194717.1,
INSD:AV561009.1,INSD:EL046125.1,INSD:EL089510.1,
INSD:EL178650.1,INSD:BP787197.1,INSD:EL329101.1,
INSD:DR256976.1,INSD:EL172454.1,INSD:EH885729.1,
INSD:AV526250.1"
/inference="similar to RNA sequence,
mRNA:INSD:U37247.1,INSD:AY065093.1,INSD:AY058103.1,
INSD:AF424550.1,INSD:BT002632.1"
/note="SECY homolog 1 (SCY1); FUNCTIONS IN:
P-P-bond-hydrolysis-driven protein transmembrane
transporter activity; INVOLVED IN: protein secretion,
protein transport; LOCATED IN: chloroplast, membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: SecY protein
(InterPro:IPR002208); BEST Arabidopsis thaliana protein
match is: SecY protein transport family protein
(TAIR:AT2G31530.1); Has 9180 Blast hits to 9165 proteins
in 2700 species: Archae - 72; Bacteria - 5385; Metazoa -
19; Fungi - 2; Plants - 102; Viruses - 0; Other Eukaryotes
- 3600 (source: NCBI BLink)."
/db_xref="Araport:AT2G18710"
/db_xref="TAIR:AT2G18710"
intron_pos 68:2 (1/5)
intron_pos 121:1 (2/5)
intron_pos 350:0 (3/5)
intron_pos 421:1 (4/5)
intron_pos 476:0 (5/5)
BEGIN
1 MITVSEVSSY SSSSSNFASL SRLNHKSSSR LRSSSLYKGS FFSVSTKTRR NTCKAKSWNL
61 GLVINSRSSE ASVFDPLGIN PDETSGLSSI WESFVSLLSP SFESSSGNRR DKPSSGRGVA
121 AAIEDSSIDF GDFFKGPLPG KFLKLLGFLA LSRLGIYIPL GGVNREAFVG NLDQNSILST
181 LDTFSGGGIG RLGICSLGIV PFINAQIVFQ LLAQVYPKLQ DLQKKEGEAG RKKILQYTRY
241 ASVGFAIVQA IGQVFYLRPY VNDFSTEWVV SSVTLLTLGS VLTTYIGERI SDLKLGNGTS
301 LLIFTSIISY LPASFGRTTA EALQEGNYTG LGTIVVSFLL LVLGIVYVQE AERKIPLNYA
361 SRYTSKAGGL QKSAYLPFKV NSAGVMPIIF STSSLALPAT LARFTGISAL KNVAFALTPG
421 GSFYLPTNIL LIAFFNYYYT FLQLDPDDVS EQLKRQGASI PLVRPGKSTA LFIKTVLGRI
481 SVLGSAFLAV LAAGPAVVEQ ITHLTAFRGF AGTSVLILVG CATDTARKVQ AEIISQKYKN
541 IEFYELDKYD P
//