LOCUS AEC06791.1 181 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002685-1905
PROTEIN_ID AEC06791.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G18670"
/gene_synonym="MSF3.5"
/gene_synonym="MSF3_5"
/inference="Similar to RNA sequence,
EST:INSD:EH976223.1,INSD:DR298991.1,INSD:Z30481.1,
INSD:AV824718.1,INSD:EL252112.1,INSD:EL178166.1,
INSD:EL170664.1,INSD:EL238168.1,INSD:EH965627.1,
INSD:EL313869.1,INSD:EL263541.1,INSD:EL125602.1,
INSD:EL027163.1,INSD:DR381175.1,INSD:N96758.1,
INSD:EL124309.1,INSD:EL110071.1,INSD:EL214606.1,
INSD:AV550573.1,INSD:EL144551.1,INSD:EL146942.1,
INSD:DR266074.1,INSD:AI993746.1,INSD:Z30480.1,
INSD:AV787361.1,INSD:AV441183.1,INSD:EH956731.1,
INSD:EL326180.1,INSD:DR378257.1,INSD:EG527303.1,
INSD:EL202459.1,INSD:EG527304.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY052699.1,INSD:BX842428.1,INSD:AY088712.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc
finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana
protein match is: RING/U-box superfamily protein
(TAIR:AT4G30370.1); Has 8378 Blast hits to 8356 proteins
in 272 species: Archae - 0; Bacteria - 0; Metazoa - 2196;
Fungi - 602; Plants - 4554; Viruses - 20; Other Eukaryotes
- 1006 (source: NCBI BLink)."
/db_xref="Araport:AT2G18670"
/db_xref="TAIR:AT2G18670"
intron_pos 181:2 (1/1)
BEGIN
1 MPPTNNYRIS GEPPSTTPSH PPPKPKTRIL SLFLVGVIMF SIFFLFLVLI GIASVLILPL
61 LLSSLHRHHR RRRRNRRQES SDGLSSRFVK KLPQFKFSEP STYTRYESDC VVCFDGFRQG
121 QWCRNLPGCG HVFHRKCVDT WLLKASTCPI CRARVRLWEE DPQEGELWRC FGHRRSSLLD
181 L
//