LOCUS AEC06780.1 220 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana homeobox protein 21 protein.
ACCESSION CP002685-1893
PROTEIN_ID AEC06780.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="HB21"
/locus_tag="AT2G18550"
/gene_synonym="ATHB21"
/gene_synonym="F24H14.10"
/gene_synonym="F24H14_10"
/gene_synonym="HB-2"
/gene_synonym="homeobox protein 21"
/gene_synonym="homeobox-2"
/inference="Similar to RNA sequence,
EST:INSD:ES019890.1,INSD:ES010284.1,INSD:DR750744.1,
INSD:ES047796.1,INSD:DR750688.1,INSD:DR750747.1,
INSD:DR750746.1,INSD:DR750857.1,INSD:DR750745.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT031362.1,INSD:BT031368.1"
/note="homeobox protein 21 (HB21); FUNCTIONS IN: DNA
binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription,
DNA-dependent, regulation of transcription; LOCATED IN:
nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Homeobox, conserved site (InterPro:IPR017970), Homeobox
(InterPro:IPR001356), Homeodomain-like
(InterPro:IPR009057), Helix-turn-helix motif, lambda-like
repressor (InterPro:IPR000047), Homeodomain-related
(InterPro:IPR012287); BEST Arabidopsis thaliana protein
match is: homeobox protein 40 (TAIR:AT4G36740.1); Has 7525
Blast hits to 7522 proteins in 427 species: Archae - 0;
Bacteria - 0; Metazoa - 5302; Fungi - 235; Plants - 1881;
Viruses - 3; Other Eukaryotes - 104 (source: NCBI BLink)."
/db_xref="Araport:AT2G18550"
/db_xref="TAIR:AT2G18550"
intron_pos 30:1 (1/2)
intron_pos 143:0 (2/2)
BEGIN
1 MNNQNVDDHN LLLISQLYPN VYTPLVPQQG GEAKPTRRRK RKSKSVVVAE EGENEGNGWF
61 RKRKLSDEQV RMLEISFEDD HKLESERKDR LASELGLDPR QVAVWFQNRR ARWKNKRVED
121 EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE
181 ANHTTPFFGD YDIGFDGEAD ENLLYSPDYI DGLDWMSQFM
//