LOCUS AEC06777.1 418 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-1889
PROTEIN_ID AEC06777.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G18520"
/gene_synonym="F24H14.13"
/gene_synonym="F24H14_13"
/inference="Similar to RNA sequence,
EST:INSD:ES204917.1,INSD:ES028630.1,INSD:DR233926.1,
INSD:DR233928.1,INSD:DR233927.1,INSD:DR371387.1,
INSD:EL044585.1"
/inference="similar to RNA sequence, mRNA:INSD:AY088617.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; INVOLVED IN: biological_process unknown; LOCATED
IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein (TAIR:AT4G36680.1);
Has 27260 Blast hits to 10896 proteins in 232 species:
Archae - 1; Bacteria - 5; Metazoa - 93; Fungi - 122;
Plants - 26343; Viruses - 0; Other Eukaryotes - 696
(source: NCBI BLink)."
/db_xref="Araport:AT2G18520"
/db_xref="TAIR:AT2G18520"
BEGIN
1 MTSSRLYLRF LRRFSTATGI DSQTTAYPGA ITMSKAKSKL RKVQDPDKAL AIYKSVSNNS
61 TSPLSSRYAM ELTVQRLAKS QRFSDIEALI ESHKNNPKIK TETFLSTLIR SYGRASMFDH
121 AMKMFEEMDK LGTPRTVVSF NALLAACLHS DLFERVPQLF DEFPQRYNNI TPDKISYGML
181 IKSYCDSGKP EKAMEIMRDM EVKGVEVTII AFTTILGSLY KNGLVDEAES LWIEMVNKGC
241 DLDNTVYNVR LMNAAKESPE RVKELMEEMS SVGLKPDTVS YNYLMTAYCV KGMMSEAKKV
301 YEGLEQPNAA TFRTLIFHLC INGLYDQGLT VFKKSAIVHK IPDFKTCKHL TEGLVKNNRM
361 EDARGVARIV KKKFPPRLVT EWKKLEEKLG LYSKGNAAAV SSSSQTREVL DQEREDDV
//