LOCUS AEC06763.1 208 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana GATA transcription factor 20 protein.
ACCESSION CP002685-1870
PROTEIN_ID AEC06763.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="GATA20"
/locus_tag="AT2G18380"
/gene_synonym="GATA transcription factor 20"
/gene_synonym="hanaba taranu like 1"
/gene_synonym="HANL1"
/gene_synonym="T30D6.11"
/gene_synonym="T30D6_11"
/inference="Similar to RNA sequence,
EST:INSD:DR751596.1,INSD:DR751602.1,INSD:ES179608.1"
/inference="similar to RNA sequence, mRNA:INSD:BT029505.1"
/note="GATA transcription factor 20 (GATA20); FUNCTIONS
IN: sequence-specific DNA binding transcription factor
activity; INVOLVED IN: regulation of transcription,
DNA-dependent; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 6 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088),
Zinc finger, GATA-type (InterPro:IPR000679); BEST
Arabidopsis thaliana protein match is: GATA transcription
factor 19 (TAIR:AT4G36620.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="Araport:AT2G18380"
/db_xref="TAIR:AT2G18380"
intron_pos 114:0 (1/1)
BEGIN
1 MMGYQTNSNF SMFFSSENDD QNHHNYDPYN NFSSSTSVDC TLSLGTPSTR LDDHHRFSSA
61 NSNNISGDFY IHGGNAKTSS YKKGGVAHSL PRRCASCDTT STPLWRNGPK GPKSLCNACG
121 IRFKKEERRA TARNLTISGG GSSAAEVPVE NSYNGGGNYY SHHHHHYASS SPSWAHQNTQ
181 RVPYFSPVPE MEYPYVDNVT ASSFMSWN
//