LOCUS AEC06753.1 337 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-
binding superfamily protein protein.
ACCESSION CP002685-1859
PROTEIN_ID AEC06753.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="HBI1"
/locus_tag="AT2G18300"
/gene_synonym="HOMOLOG OF BEE2 INTERACTING WITH IBH 1"
/gene_synonym="T30D6.19"
/gene_synonym="T30D6_19"
/inference="Similar to RNA sequence,
EST:INSD:EH881119.1,INSD:EL211299.1,INSD:EL135130.1,
INSD:EH936606.1,INSD:EL243067.1,INSD:AV787572.1,
INSD:EH830201.1,INSD:EL199101.1,INSD:EL271123.1,
INSD:EL332226.1,INSD:EH856274.1,INSD:EL281011.1,
INSD:EL068854.1,INSD:EL123444.1,INSD:BP627406.1,
INSD:AV442701.1,INSD:AV440826.1,INSD:EH886499.1,
INSD:EL335063.1,INSD:EL012734.1,INSD:EL118824.1,
INSD:EL212264.1,INSD:EL125224.1,INSD:EH870694.1,
INSD:EH807490.1,INSD:EL073175.1,INSD:EL306363.1,
INSD:EH836229.1,INSD:BP661122.1,INSD:EL281040.1,
INSD:DR318570.1,INSD:EL135268.1,INSD:EL100693.1,
INSD:EL178216.1,INSD:EH950715.1,INSD:BP629853.1,
INSD:EH814433.1,INSD:EH825512.1,INSD:EL002418.1,
INSD:EL006918.1,INSD:EL017551.1,INSD:EL032814.1,
INSD:EL296149.1,INSD:EH819505.1,INSD:BP666010.1,
INSD:BP660622.1,INSD:BU636677.1,INSD:EH951374.1,
INSD:EH860929.1,INSD:EL228114.1,INSD:EL168068.1,
INSD:EL239142.1,INSD:EL320339.1,INSD:EL123374.1,
INSD:EL300139.1,INSD:EL295769.1,INSD:EL081221.1,
INSD:EL208425.1,INSD:BP867711.1,INSD:AV824761.1,
INSD:EH942252.1,INSD:EH906641.1,INSD:EL036675.1,
INSD:BP852320.1,INSD:EL015501.1,INSD:EL205659.1,
INSD:AV519883.1,INSD:EL141714.1,INSD:BP662656.1,
INSD:EH831097.1,INSD:EH899601.1,INSD:BP602874.1,
INSD:DR370426.1,INSD:BP843410.1,INSD:EH968325.1"
/inference="similar to RNA sequence, mRNA:INSD:AF488597.1"
/note="basic helix-loop-helix (bHLH) DNA-binding
superfamily protein; FUNCTIONS IN: sequence-specific DNA
binding transcription factor activity; INVOLVED IN:
response to cytokinin stimulus, regulation of
transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain
(InterPro:IPR001092), Helix-loop-helix DNA-binding
(InterPro:IPR011598); BEST Arabidopsis thaliana protein
match is: BR enhanced expression 2 (TAIR:AT4G36540.1); Has
2064 Blast hits to 2056 proteins in 122 species: Archae -
0; Bacteria - 4; Metazoa - 81; Fungi - 43; Plants - 1919;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink)."
/db_xref="Araport:AT2G18300"
/db_xref="TAIR:AT2G18300"
intron_pos 129:0 (1/5)
intron_pos 202:0 (2/5)
intron_pos 247:0 (3/5)
intron_pos 271:0 (4/5)
intron_pos 316:0 (5/5)
BEGIN
1 MLEGLVSQES LSLNSMDMSV LERLKWVQQQ QQQLQQVVSH SSNNSPELLQ ILQFHGSNND
61 ELLESSFSQF QMLGSGFGPN YNMGFGPPHE SISRTSSCHM EPVDTMEVLL KTGEETRAVA
121 LKNKRKPEVK TREEQKTEKK IKVEAETESS MKGKSNMGNT EASSDTSKET SKGASENQKL
181 DYIHVRARRG QATDRHSLAE RARREKISKK MKYLQDIVPG CNKVTGKAGM LDEIINYVQC
241 LQRQVEFLSM KLAVLNPELE LAVEDVSVKQ FQAYFTNVVA SKQSIMVDVP LFPLDQQGSL
301 DLSAINPNQT TSIEAPSGSW ETQSQSLYNT SSLGFHY
//