LOCUS AEC06728.1 222 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SHI-related sequence 4 protein.
ACCESSION CP002685-1828
PROTEIN_ID AEC06728.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SRS4"
/locus_tag="AT2G18120"
/gene_synonym="F8D23.10"
/gene_synonym="F8D23_10"
/gene_synonym="SHI-related sequence 4"
/inference="Similar to RNA sequence,
EST:INSD:DR750240.1,INSD:DR749916.1"
/inference="similar to RNA sequence, mRNA:INSD:AF127105.1"
/note="SHI-related sequence 4 (SRS4); CONTAINS InterPro
DOMAIN/s: Lateral Root Primordium type 1, C-terminal
(InterPro:IPR006511), Zinc finger, Lateral Root Primordium
type 1 (InterPro:IPR006510), Protein of unknown function
DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana
protein match is: Lateral root primordium (LRP)
protein-related (TAIR:AT4G36260.1); Has 174 Blast hits to
174 proteins in 19 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 174; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G18120"
/db_xref="TAIR:AT2G18120"
intron_pos 150:1 (1/1)
BEGIN
1 MSNFEMAGTG SSRNNEEDNQ QNTNWVWYKH TNNNLSTSHN NQIWQQPSLD LYPGQIDVCD
61 MTTSSRSLTI SCQECGNQAK KGCTHGRCRT CCKSNGLHCP THVRSTWIPI AKRRERQQQL
121 QTPTSNPTGG SGRVGKYRDI NQHATLDSSG LEMGETRFPD EVSSDALFRC VRMSGTDDGE
181 GQYAYQTTVG IAGHLFKGIL YNQGPENKSM RSTQFYENPP RS
//