LOCUS AEC06727.1 231 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Translation elongation factor EF1B/
ribosomal protein S6 family protein protein.
ACCESSION CP002685-1826
PROTEIN_ID AEC06727.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G18110"
/gene_synonym="T27K22.2"
/gene_synonym="T27K22_2"
/inference="Similar to RNA sequence,
EST:INSD:ES064183.1,INSD:DR205602.1,INSD:EL254963.1,
INSD:ES165135.1,INSD:EL039607.1,INSD:DR205583.1,
INSD:BP801413.1,INSD:EG482110.1,INSD:AA395800.1,
INSD:DR205605.1,INSD:DR205599.1,INSD:DR205593.1,
INSD:AV823714.1,INSD:DR205607.1,INSD:EL290498.1,
INSD:EL183376.1,INSD:EL331307.1,INSD:DR205600.1,
INSD:DR205586.1,INSD:CB259259.1,INSD:DR205596.1,
INSD:EL111254.1,INSD:EG500180.1,INSD:Z26714.1,
INSD:AA713196.1,INSD:DR205603.1,INSD:BP634938.1,
INSD:DR205609.1,INSD:DR205590.1,INSD:ES185370.1,
INSD:EL046951.1,INSD:DR205608.1,INSD:ES077656.1,
INSD:DR205598.1,INSD:EL290123.1,INSD:EL295691.1,
INSD:DR205611.1,INSD:BE530873.1,INSD:EH828595.1,
INSD:BP560621.1,INSD:BP577792.1,INSD:AV540517.1,
INSD:AV539290.1,INSD:DR205604.1,INSD:DR205584.1,
INSD:Z18084.1,INSD:BP807074.1,INSD:BP573276.1,
INSD:EL998769.1,INSD:AV551705.1,INSD:EH919341.1,
INSD:DR205601.1,INSD:BP601413.1,INSD:BP805199.1,
INSD:N97130.1,INSD:DR375520.1,INSD:AV552748.1,
INSD:EL150408.1,INSD:DR205589.1,INSD:AV784738.1,
INSD:DR205587.1,INSD:EL273896.1,INSD:EL204106.1,
INSD:EL279201.1,INSD:AV804911.1,INSD:EH851993.1,
INSD:ES048081.1,INSD:ES189899.1,INSD:DR205610.1,
INSD:DR205594.1,INSD:EL341834.1,INSD:BP583843.1,
INSD:DR205585.1,INSD:EG500179.1,INSD:DR205588.1,
INSD:BP632304.1,INSD:DR205606.1,INSD:DR205597.1,
INSD:DR205595.1,INSD:ES183605.1,INSD:EL987227.1,
INSD:BP608898.1,INSD:AV540310.1,INSD:AV804965.1,
INSD:DR205592.1,INSD:BP811595.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY087429.1,INSD:BX820727.1,INSD:AY065159.1,
INSD:AY081568.1,INSD:BX820611.1,INSD:BX820768.1"
/note="Translation elongation factor EF1B/ribosomal
protein S6 family protein; FUNCTIONS IN: translation
elongation factor activity; INVOLVED IN: translational
elongation; LOCATED IN: eukaryotic translation elongation
factor 1 complex; EXPRESSED IN: male gametophyte, pollen
tube; EXPRESSED DURING: L mature pollen stage, M
germinated pollen stage; CONTAINS InterPro DOMAIN/s:
Translation elongation factor EF1B/ribosomal protein S6
(InterPro:IPR014717), Translation elongation factor EF1B,
beta/delta subunit, guanine nucleotide exchange
(InterPro:IPR014038), Translation elongation factor EF1B,
beta/delta chains, conserved site (InterPro:IPR001326);
BEST Arabidopsis thaliana protein match is: Glutathione
S-transferase, C-terminal-like;Translation elongation
factor EF1B/ribosomal protein S6 (TAIR:AT1G30230.1); Has
1014 Blast hits to 1012 proteins in 273 species: Archae -
0; Bacteria - 6; Metazoa - 527; Fungi - 160; Plants - 164;
Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink)."
/db_xref="Araport:AT2G18110"
/db_xref="TAIR:AT2G18110"
intron_pos 28:2 (1/4)
intron_pos 67:2 (2/4)
intron_pos 140:1 (3/4)
intron_pos 232:1 (4/4)
BEGIN
1 MAAFPNLNSG SGLKKLDEHL LTRSYITGYQ ASKDDITVFT ALSKPPTSEF VNVSRWFNHI
61 DALLRISGVS AEGSGVIVEG SSPITEEAVA TPPAADSKDT AAEEEDDDDV DLFGEETEEE
121 KKAAEERAAS VKASTKKKES GKSSVLMDIK PWDDETDMKK LEEAVRSIQM EGLFWGASKL
181 VPVGYGIKKL HIMCTIVDDL VSIDTMIEEQ LTVEPINEYV QSCDIVAFNK I
//