LOCUS AEC06710.1 268 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc finger (Ran-binding) family
protein protein.
ACCESSION CP002685-1799
PROTEIN_ID AEC06710.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G17975"
/gene_synonym="T27K22.20"
/inference="Similar to RNA sequence,
EST:INSD:DR311228.1,INSD:DR311236.1,INSD:DR311225.1,
INSD:AU238956.1,INSD:DR311223.1,INSD:DR311230.1,
INSD:DR377908.1,INSD:DR196495.1,INSD:DR311234.1,
INSD:EL250394.1,INSD:EG526256.1,INSD:EG526267.1,
INSD:EL977989.1,INSD:DR311237.1,INSD:DR311233.1,
INSD:EH881595.1,INSD:AU228935.1,INSD:AU230207.1,
INSD:EH976322.1,INSD:DR311231.1,INSD:DR311227.1,
INSD:BP619890.1,INSD:AI997783.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT015844.1,INSD:BT015337.1"
/note="zinc finger (Ran-binding) family protein; FUNCTIONS
IN: binding, zinc ion binding; INVOLVED IN:
biological_process unknown; LOCATED IN: intracellular;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger,
RanBP2-type (InterPro:IPR001876); BEST Arabidopsis
thaliana protein match is: Ran BP2/NZF zinc finger-like
superfamily protein (TAIR:AT2G26695.1); Has 1281 Blast
hits to 744 proteins in 145 species: Archae - 0; Bacteria
- 0; Metazoa - 342; Fungi - 88; Plants - 606; Viruses - 0;
Other Eukaryotes - 245 (source: NCBI BLink)."
/db_xref="Araport:AT2G17975"
/db_xref="TAIR:AT2G17975"
intron_pos 56:1 (1/6)
intron_pos 146:0 (2/6)
intron_pos 156:1 (3/6)
intron_pos 181:0 (4/6)
intron_pos 223:2 (5/6)
intron_pos 250:2 (6/6)
BEGIN
1 MGDGREGDWE CLGCRNRNYA FRSFCNRCKQ PRLIMDNNTS PNSKWLPRIG DWICTGCTNN
61 NYASREKCKK CGQSKEVAAL SALAIPGASL QTHLHYFTRG PESHDQPGSL LAFSNATNQA
121 SVHKEWRSGD WICRCGFHNY SSRIQCKKCN EIAPLALGTK RLASEALAHE WDSKRLNQGY
181 TSMQTQSAIY ASFPGMSLGR VSNWQLPLPF LQQHSTPALL GMGVKQWRDG DWMCTNCKNH
241 NYASRAECNR CKTTRDILDQ DITPTEQS
//