LOCUS AEC06675.1 241 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana NEP-interacting protein 2 protein.
ACCESSION CP002685-1747
PROTEIN_ID AEC06675.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="NIP2"
/locus_tag="AT2G17730"
/gene_synonym="NEP-interacting protein 2"
/gene_synonym="T17A5.9"
/gene_synonym="T17A5_9"
/inference="Similar to RNA sequence,
EST:INSD:EL200863.1,INSD:AU239462.1,INSD:EL301630.1,
INSD:EL103237.1,INSD:AV551599.1,INSD:DR352386.1,
INSD:DR352379.1,INSD:EL044810.1,INSD:AV521888.1,
INSD:EL044106.1,INSD:EL236402.1,INSD:AV808117.1,
INSD:DR352389.1,INSD:DR352382.1,INSD:BP826778.1,
INSD:EL205238.1,INSD:EL320484.1,INSD:EL132710.1,
INSD:EH821644.1,INSD:DR379590.1,INSD:DR375017.1,
INSD:EL061194.1,INSD:EL225109.1,INSD:EL123305.1,
INSD:EL207634.1,INSD:EH818156.1,INSD:EL218584.1,
INSD:EL162786.1,INSD:EH875250.1,INSD:DR352385.1,
INSD:EH842420.1,INSD:DR256865.1,INSD:EL089243.1,
INSD:DR352388.1,INSD:EH839007.1,INSD:BP823695.1,
INSD:EH827360.1,INSD:EL215947.1,INSD:EH804912.1,
INSD:ES153005.1,INSD:DR352387.1,INSD:DR352383.1,
INSD:EL299111.1,INSD:EH796979.1,INSD:AU230771.1,
INSD:DR352380.1,INSD:DR352381.1,INSD:EL106126.1,
INSD:EL250063.1,INSD:EL316483.1,INSD:DR352384.1,
INSD:EL325486.1,INSD:AV539195.1,INSD:EL033099.1,
INSD:DR352390.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX820731.1,INSD:AJ400898.1,INSD:AK118593.1"
/note="NEP-interacting protein 2 (NIP2); CONTAINS InterPro
DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841);
BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT4G35840.1); Has 9242 Blast
hits to 9216 proteins in 266 species: Archae - 0; Bacteria
- 2; Metazoa - 2260; Fungi - 688; Plants - 5081; Viruses -
18; Other Eukaryotes - 1193 (source: NCBI BLink)."
/db_xref="Araport:AT2G17730"
/db_xref="TAIR:AT2G17730"
intron_pos 58:1 (1/4)
intron_pos 118:0 (2/4)
intron_pos 146:0 (3/4)
intron_pos 202:0 (4/4)
BEGIN
1 MASSSSSSYR FQSGSYPLSS SPSLGNFVER IKDACHFLVS AVLGTIISAI LTFFFALVGT
61 LLGALTGALI GQETESGFIR GAAIGAISGA VFSIEVFESS LDLWKSDESG FGCFLYLIDV
121 IVSLLSGRLV RERIGPAMLS AVQSQMGAVD TAFDDHTSLF DTGGSKGLTG DLVEKIPKMT
181 ITGNNNTDAS ENTDSCSVCL QDFQLGETVR SLPHCHHMFH LPCIDNWLLR HGSCPMCRRD
241 I
//