LOCUS AEC06664.1 463 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-1734
PROTEIN_ID AEC06664.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G17670"
/gene_synonym="T17A5.11"
/gene_synonym="T17A5_11"
/inference="Similar to RNA sequence,
EST:INSD:BE530276.1,INSD:EL256343.1,INSD:EG485779.1,
INSD:AU228062.1,INSD:EG485766.1,INSD:ES192401.1,
INSD:AV557526.1,INSD:DR256889.1,INSD:AU237046.1,
INSD:EH884438.1,INSD:BX838045.1,INSD:DR381090.1,
INSD:AV558403.1,INSD:BP807739.1,INSD:BX834868.1,
INSD:DR256888.1,INSD:EH944244.1,INSD:DR256887.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT005703.1,INSD:BX819919.1,INSD:BT004095.1,
INSD:BX842036.1,INSD:AY085478.1,INSD:BX820849.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide
repeat (InterPro:IPR002885); BEST Arabidopsis thaliana
protein match is: Pentatricopeptide repeat (PPR)
superfamily protein (TAIR:AT3G53700.1); Has 45396 Blast
hits to 13729 proteins in 280 species: Archae - 5;
Bacteria - 33; Metazoa - 451; Fungi - 602; Plants - 42971;
Viruses - 0; Other Eukaryotes - 1334 (source: NCBI
BLink)."
/db_xref="Araport:AT2G17670"
/db_xref="TAIR:AT2G17670"
BEGIN
1 MGKVPSSFRS MPANLLVRKT TPSPPAPPRD FRNRTAVGGD SAKLPQNTQA PREPSLRNPF
61 KSPNLSDAKS LFNSIAATSR IPLDLKFHNS VLQSYGSIAV VNDTVKLFQH ILKSQPNFRP
121 GRSTFLILLS HACRAPDSSI SNVHRVLNLM VNNGLEPDQV TTDIAVRSLC ETGRVDEAKD
181 LMKELTEKHS PPDTYTYNFL LKHLCKCKDL HVVYEFVDEM RDDFDVKPDL VSFTILIDNV
241 CNSKNLREAM YLVSKLGNAG FKPDCFLYNT IMKGFCTLSK GSEAVGVYKK MKEEGVEPDQ
301 ITYNTLIFGL SKAGRVEEAR MYLKTMVDAG YEPDTATYTS LMNGMCRKGE SLGALSLLEE
361 MEARGCAPND CTYNTLLHGL CKARLMDKGM ELYEMMKSSG VKLESNGYAT LVRSLVKSGK
421 VAEAYEVFDY AVDSKSLSDA SAYSTLETTL KWLKKAKEQG LVP
//