LOCUS AEC06637.1 396 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Auxin efflux carrier family protein protein.
ACCESSION CP002685-1708
PROTEIN_ID AEC06637.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G17500"
/gene_synonym="MJB20.6"
/gene_synonym="MJB20_6"
/gene_synonym="PILS5"
/gene_synonym="PIN-LIKES 5"
/inference="Similar to RNA sequence,
EST:INSD:BP810035.1,INSD:EL256032.1,INSD:H36360.1,
INSD:AA728547.1,INSD:BP599081.1,INSD:BP584966.1,
INSD:BP583132.1,INSD:BP617909.1,INSD:BP800212.1,
INSD:EL253213.1,INSD:BP618457.1,INSD:T04264.1,
INSD:AV813888.1,INSD:BP576470.1,INSD:DR354037.1,
INSD:EL123172.1,INSD:AV819802.1,INSD:BP607683.1,
INSD:BP582006.1,INSD:BP618472.1,INSD:BP578382.1,
INSD:CB185939.1,INSD:BP582408.1,INSD:BP806287.1,
INSD:BP579611.1,INSD:BP571869.1,INSD:CB185476.1,
INSD:EG520497.1,INSD:BP804884.1,INSD:BP578271.1,
INSD:DR296715.1,INSD:BP614901.1,INSD:EG488315.1,
INSD:BP803659.1,INSD:BP602411.1,INSD:BP654991.1,
INSD:BP615370.1,INSD:DR383539.1,INSD:AV551320.1,
INSD:CB185567.1,INSD:EG488316.1,INSD:BP649748.1,
INSD:BP599859.1,INSD:BP583109.1,INSD:BP606225.1,
INSD:BP805445.1,INSD:AV783831.1,INSD:BP621493.1,
INSD:BP567497.1,INSD:BP584951.1,INSD:EL196275.1,
INSD:BP647149.1,INSD:BP599692.1,INSD:BP598528.1,
INSD:DR379045.1,INSD:BP615995.1,INSD:EL263111.1,
INSD:BP813902.1,INSD:BP629327.1,INSD:BP577826.1,
INSD:BP570279.1,INSD:BP591644.1,INSD:BP610478.1,
INSD:BP612879.1,INSD:EL216630.1,INSD:AV801045.1,
INSD:BP608245.1,INSD:AI996804.1,INSD:CB185621.1,
INSD:BP640881.1,INSD:BP659377.1,INSD:BP586810.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX820270.1,INSD:BX820250.1"
/note="Auxin efflux carrier family protein; FUNCTIONS IN:
auxin:hydrogen symporter activity; INVOLVED IN: auxin
polar transport, transmembrane transport; LOCATED IN:
endomembrane system, integral to membrane; EXPRESSED IN:
19 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Auxin efflux carrier
(InterPro:IPR004776); BEST Arabidopsis thaliana protein
match is: Auxin efflux carrier family protein
(TAIR:AT5G65980.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G17500"
/db_xref="TAIR:AT2G17500"
intron_pos 46:0 (1/8)
intron_pos 72:2 (2/8)
intron_pos 114:1 (3/8)
intron_pos 155:0 (4/8)
intron_pos 243:0 (5/8)
intron_pos 276:2 (6/8)
intron_pos 294:1 (7/8)
intron_pos 356:1 (8/8)
BEGIN
1 MGFWSLLEVA SMPVIQVLFM SLVGAFMASD RCKLFPVEAR NSMNKVVFVL FAPALMFANL
61 AQTVTLEDII SWWFMPVNMG LTFLIGGLLG WLVVKILKPP PYLEGLIVAT CSAGNMGNLP
121 IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE
181 SEKIAIKSSN SDLEADHKTH LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL
241 GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301 KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ
361 LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV
//