LOCUS AEC06603.1 577 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana CCAAT-binding factor protein.
ACCESSION CP002685-1666
PROTEIN_ID AEC06603.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="EMB2762"
/locus_tag="AT2G17250"
/gene_synonym="EMBRYO DEFECTIVE 2762"
/gene_synonym="NOC4"
/gene_synonym="NucleOlar Complex associated 4"
/gene_synonym="T23A1.11"
/gene_synonym="T23A1_11"
/inference="Similar to RNA sequence,
EST:INSD:BP785885.1,INSD:ES045938.1,INSD:BP798580.1,
INSD:EH897508.1,INSD:BX838722.1,INSD:DR355345.1,
INSD:ES041778.1,INSD:AV825874.1,INSD:EL136397.1,
INSD:EL179817.1,INSD:BP860653.1,INSD:DR355346.1,
INSD:EL033222.1,INSD:BP852837.1,INSD:EL008840.1,
INSD:AV792747.1"
/inference="similar to RNA sequence, mRNA:INSD:AY065021.1"
/note="EMBRYO DEFECTIVE 2762 (EMB2762); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding
factor (InterPro:IPR005612); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="Araport:AT2G17250"
/db_xref="TAIR:AT2G17250"
intron_pos 120:0 (1/14)
intron_pos 151:0 (2/14)
intron_pos 175:2 (3/14)
intron_pos 195:1 (4/14)
intron_pos 212:2 (5/14)
intron_pos 246:1 (6/14)
intron_pos 267:0 (7/14)
intron_pos 301:0 (8/14)
intron_pos 320:2 (9/14)
intron_pos 379:0 (10/14)
intron_pos 436:0 (11/14)
intron_pos 483:1 (12/14)
intron_pos 502:2 (13/14)
intron_pos 538:0 (14/14)
BEGIN
1 MASILSKKQK KNEKYTLKEL KSLGHDLLTS RSHINNLPLL LTFVSPESPP QFVVESLLSL
61 QSFFTPLLSQ LPPTSSSPSS TKTEDPEVVF KAWLRSKFDE FVKLLLDVLV SQQSEDSLRG
121 IVLGTLMEFV KLLNAGRFHS SIYHRLLDAI IHSEVDIEIF LDILTSKYFK YIDVRYFTYI
181 SMEKFVKTLE ASVSADRTVI ENNEAESDSK ESLELSVRKI YQVLSQIPPP EKQAEKSQHE
241 MWSGSDESIS EKPTDKKKKT EKGDSTLLSP ATISKRMKLK FTKAWISFLR LPLPIDVYKE
301 VLASIHLTVI PHLSNPTMLC DFLTKSYDIG GVVSVMALSS LFILMTQHGL EYPFFYEKLY
361 ALLVPSVFVA KHRAKFLQLL DACLKSSMLP AYLAASFTKK LSRLSLSIPP AGSLVITALI
421 YNLLRRNPTI NHLVQEIVEN ADEANTEAGE HNESQPKTIK KRKLGIDYFN NQESDPKKSG
481 ALKSSLWEID TLRHHYCPPV SRFISSLETN LTIRSKTTEM KIEDFCSGSY ATIFGDEIRR
541 RVKQVPLAFY KTVPTSLFAD SDFPGWTFTI PQEEGTC
//