LOCUS AEC06597.1 551 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ubiquitin family protein protein.
ACCESSION CP002685-1660
PROTEIN_ID AEC06597.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="DSK2"
/locus_tag="AT2G17200"
/gene_synonym="DSK2b"
/gene_synonym="T23A1.6"
/gene_synonym="T23A1_6"
/inference="Similar to RNA sequence,
EST:INSD:ES062230.1,INSD:BE520672.1,INSD:ES199756.1,
INSD:AV539746.1,INSD:AV440270.1,INSD:EH972271.1,
INSD:ES142952.1,INSD:ES054049.1,INSD:AV817589.1,
INSD:EL307981.1,INSD:EL167105.1,INSD:BP825523.1,
INSD:ES051913.1,INSD:AV789450.1,INSD:EL063968.1,
INSD:EH833136.1,INSD:ES112883.1,INSD:ES079897.1,
INSD:BP828051.1,INSD:BP609221.1,INSD:ES176360.1,
INSD:EH954133.1,INSD:BP598906.1,INSD:EL185855.1,
INSD:EL020555.1,INSD:ES165746.1,INSD:EL341004.1,
INSD:EL290433.1,INSD:ES138511.1,INSD:BP819171.1,
INSD:BP824542.1,INSD:ES155430.1,INSD:AV801156.1,
INSD:BP806912.1,INSD:EL969916.1,INSD:ES172987.1,
INSD:EG501958.1,INSD:BP855750.1,INSD:BP565541.1,
INSD:EL145396.1,INSD:EL978593.1,INSD:EL084852.1,
INSD:EG501959.1,INSD:ES143399.1,INSD:AV519698.1,
INSD:ES172666.1,INSD:BP669519.1,INSD:BP614122.1,
INSD:EH825551.1,INSD:BP805310.1,INSD:BP608063.1,
INSD:BP846851.1,INSD:BP833696.1,INSD:AV782106.1,
INSD:EH910655.1,INSD:DR263313.1,INSD:ES191834.1,
INSD:BP838022.1,INSD:EH947544.1,INSD:AV814047.1,
INSD:ES051869.1,INSD:EH889488.1,INSD:AV542553.1,
INSD:BE525658.1,INSD:BP637429.1,INSD:BP661884.1,
INSD:EL317101.1,INSD:BE520673.1,INSD:BE520674.1,
INSD:AV541669.1,INSD:ES186563.1,INSD:BP650761.1,
INSD:DR263314.1,INSD:BP652104.1,INSD:EL128387.1,
INSD:BP598961.1,INSD:EL279419.1,INSD:EH903647.1,
INSD:BP829001.1,INSD:BP603064.1,INSD:ES119041.1,
INSD:EH810631.1,INSD:ES199441.1,INSD:ES157909.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY142486.1,INSD:BX819839.1,INSD:AY035177.1"
/note="DSK2; CONTAINS InterPro DOMAIN/s: Heat shock
chaperonin-binding (InterPro:IPR006636),
Ubiquitin-associated/translation elongation factor EF1B,
N-terminal (InterPro:IPR000449),
Ubiquitin-associated/translation elongation factor EF1B,
N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin
(InterPro:IPR015496), Ubiquitin (InterPro:IPR000626),
Ubiquitin supergroup (InterPro:IPR019955), UBA-like
(InterPro:IPR009060); BEST Arabidopsis thaliana protein
match is: ubiquitin family protein (TAIR:AT2G17190.1); Has
15379 Blast hits to 7776 proteins in 854 species: Archae -
6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants -
2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI
BLink)."
/db_xref="Araport:AT2G17200"
/db_xref="TAIR:AT2G17200"
intron_pos 77:1 (1/7)
intron_pos 332:1 (2/7)
intron_pos 410:0 (3/7)
intron_pos 448:0 (4/7)
intron_pos 465:2 (5/7)
intron_pos 475:1 (6/7)
intron_pos 503:1 (7/7)
BEGIN
1 MGGEGDSSQP QSGEGEAVAV NIRCSNGTKF SVKTSLDSTV ESFKELVAQS SDVPANQQRL
61 IYKGRILKDD QTLLSYGLQA DHTIHMVRGS APSSAPPPAP AASQTTAPSV TRGVGSDNSS
121 NLGGASPGES LFPGLGFNPL GGGNAMSGLF GAGLPDLVQT QQQLAQNPNM IRDMMNTPAI
181 QNLMNNPEFM RSMIMNNPQM RELVDRNPEL GHVLNDPSIL RQTLEAARNP ELMREMMRNT
241 DRAMSNIESM PEGFNMLRRM YENVQEPLMN ATTMSGNAGN NTGSNPFAAL LGNQGVTTQG
301 SDASNNSSTP NAGTGTIPNA NPLPNPWGAT GGQTTAPGRT NVGGDARSPG LGGLGGLGSL
361 GGLGGLGMLG ADSPLGATPD ASQLSQLLQN PAISQMMQSV FSNPQYMNQL MSLNPQLRSM
421 LDSNPQLREM MQNPDFLRQF SSPEMMQQMM TLQQSLSQNR NTASQDAGQT GAATGNNGGL
481 DLLMNMFGSL GAGGLSGTNQ SNVPPEERYA TQLQQLQEMG FYDRAENIRA LLATNGNVNA
541 AVERLLGSIG Q
//