LOCUS AEC06590.1 874 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002685-1649
PROTEIN_ID AEC06590.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G17140"
/gene_synonym="F6P23.26"
/gene_synonym="F6P23_26"
/inference="Similar to RNA sequence,
EST:INSD:ES039009.1,INSD:AU237414.1,INSD:BP614674.1,
INSD:AU228474.1"
/inference="similar to RNA sequence, mRNA:INSD:AK228914.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G65560.1); Has 62164 Blast hits to 14567
proteins in 313 species: Archae - 6; Bacteria - 60;
Metazoa - 703; Fungi - 1051; Plants - 58243; Viruses - 0;
Other Eukaryotes - 2101 (source: NCBI BLink)."
/db_xref="Araport:AT2G17140"
/db_xref="TAIR:AT2G17140"
intron_pos 833:2 (1/1)
BEGIN
1 MEQSLVKALL KNTNNPRLAW RIFKRIFSSP SEESHGISLD ATPTIARILV RAKMHEEIQE
61 LHNLILSSSI QKTKLSSLLS VVSIFAKSNH IDKAFPQFQL VRSRFPENKP SVYLYNLLLE
121 SCIKERRVEF VSWLYKDMVL CGIAPQTYTF NLLIRALCDS SCVDAARELF DEMPEKGCKP
181 NEFTFGILVR GYCKAGLTDK GLELLNAMES FGVLPNKVIY NTIVSSFCRE GRNDDSEKMV
241 EKMREEGLVP DIVTFNSRIS ALCKEGKVLD ASRIFSDMEL DEYLGLPRPN SITYNLMLKG
301 FCKVGLLEDA KTLFESIREN DDLASLQSYN IWLQGLVRHG KFIEAETVLK QMTDKGIGPS
361 IYSYNILMDG LCKLGMLSDA KTIVGLMKRN GVCPDAVTYG CLLHGYCSVG KVDAAKSLLQ
421 EMMRNNCLPN AYTCNILLHS LWKMGRISEA EELLRKMNEK GYGLDTVTCN IIVDGLCGSG
481 ELDKAIEIVK GMRVHGSAAL GNLGNSYIGL VDDSLIENNC LPDLITYSTL LNGLCKAGRF
541 AEAKNLFAEM MGEKLQPDSV AYNIFIHHFC KQGKISSAFR VLKDMEKKGC HKSLETYNSL
601 ILGLGIKNQI FEIHGLMDEM KEKGISPNIC TYNTAIQYLC EGEKVEDATN LLDEMMQKNI
661 APNVFSFKYL IEAFCKVPDF DMAQEVFETA VSICGQKEGL YSLMFNELLA AGQLLKATEL
721 LEAVLDRGFE LGTFLYKDLV ESLCKKDELE VASGILHKMI DRGYGFDPAA LMPVIDGLGK
781 MGNKKEANSF ADKMMEMASV GEVANKVDPN ARDIHQKKHN KNGGNNWQNI LHRDDGSGIA
841 LRSLSRVKKG WGQGDISSFQ PPRVDYLDYW EDDG
//