LOCUS AEC06573.1 656 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box/RNI-like superfamily protein protein.
ACCESSION CP002685-1623
PROTEIN_ID AEC06573.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G17020"
/gene_synonym="F6P23.18"
/gene_synonym="F6P23_18"
/inference="Similar to RNA sequence,
EST:INSD:DR382005.1,INSD:EH936573.1,INSD:ES125517.1,
INSD:BP605985.1,INSD:EL982904.1,INSD:EG489645.1,
INSD:EG489647.1,INSD:ES097826.1,INSD:EH968569.1,
INSD:AV830878.1,INSD:EH875348.1,INSD:EL296599.1,
INSD:T43411.1,INSD:AV827196.1,INSD:EL305468.1,
INSD:ES019954.1,INSD:DR307531.1,INSD:EL177172.1,
INSD:BX836422.1,INSD:ES008373.1,INSD:DR372065.1,
INSD:BP617453.1,INSD:AV797496.1,INSD:BP610846.1,
INSD:EL260711.1,INSD:EL312092.1,INSD:AV813621.1,
INSD:AA395289.1,INSD:ES175073.1,INSD:AV798706.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY133615.1,INSD:AF367303.1,INSD:BX821534.1,
INSD:BX819062.1,INSD:AY085127.1"
/note="F-box/RNI-like superfamily protein; CONTAINS
InterPro DOMAIN/s: F-box domain, cyclin-like
(InterPro:IPR001810), F-box domain, Skp2-like
(InterPro:IPR022364); BEST Arabidopsis thaliana protein
match is: RNI-like superfamily protein (TAIR:AT1G55590.1);
Has 4669 Blast hits to 2409 proteins in 221 species:
Archae - 0; Bacteria - 377; Metazoa - 1922; Fungi - 539;
Plants - 1335; Viruses - 3; Other Eukaryotes - 493
(source: NCBI BLink)."
/db_xref="Araport:AT2G17020"
/db_xref="TAIR:AT2G17020"
intron_pos 71:0 (1/3)
intron_pos 139:2 (2/3)
intron_pos 171:0 (3/3)
BEGIN
1 MATTTVVCGG GGDVEGCDGE RSLDLLPAAL LETIMTKLDV ASLCSLASTC KTLKSCVTRV
61 LTFTPNFHIF NVSLSMETVR PLLFPNQQLS SLKLDCGRLG NSAIDILVRP SLREISLHNC
121 RDFSGDLISE IGRKCKDLRL LCLGSVAEKV GRSISRCALE DLLNGCSHLE VLALMFDLSL
181 YLRPGDGRIF GLVSDRLTHL ELGHITSRMM TQLLTSTEIS GQDSNRVTTS TVLQNVQRLR
241 LSVDCITDAV VKAISKSLPS LIDLDIRDAP LEDPRQVSDL TDFGLHEINQ NGKLKHLSLI
301 RSQEFHPTYF RRVSDQGMLF LADKCLGMET ICLGGFCRVT DAGFKTILHS CASLSKFSIY
361 HGPKLTDLVF HDILATTLSL SHVSLRRCHL LTDHAIQKLA SSLKLENLDL RGCRNLRDET
421 LTAVSHLPKL KVLLLDGADI SDTGLSYLKE GVLDSLVSLS VRGCRNLTDK FMSTLFDGSS
481 KLALRELDLS NLPNLTDAAI FALAKSGAPI TKLQLRECRL IGDASVMALA STRVYEDECP
541 GSSLCLLDLY DCGGITQLSF KWLKKPFFPR LKWLGITGSV NRDIVDALAR RRPHLQVSCR
601 GEELGNDGED DWDSADIHQH IEAQEDELEQ WILGDEGDVE MEDAEDESEE DASEED
//