LOCUS AEC06540.1 372 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana high-affinity nickel-transport family
protein protein.
ACCESSION CP002685-1559
PROTEIN_ID AEC06540.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G16800"
/gene_synonym="T24I21.21"
/gene_synonym="T24I21_21"
/inference="Similar to RNA sequence,
EST:INSD:DR224073.1,INSD:EL171887.1,INSD:EL309506.1,
INSD:EL166698.1,INSD:BP821569.1,INSD:EG517855.1,
INSD:DR224072.1,INSD:EL325503.1,INSD:EL199876.1,
INSD:BP581879.1,INSD:EL320610.1,INSD:BP607594.1,
INSD:BP806369.1,INSD:EL260067.1,INSD:CF774232.1,
INSD:BP628898.1,INSD:DR224074.1,INSD:BP577763.1,
INSD:AV790382.1,INSD:BP569195.1,INSD:EL065813.1,
INSD:DR373697.1,INSD:N64979.1,INSD:DR224070.1,
INSD:AV441205.1,INSD:BP619456.1,INSD:BP637056.1,
INSD:AV542953.1,INSD:ES079182.1,INSD:DR224520.1,
INSD:EL981738.1,INSD:BP842927.1,INSD:EL187774.1,
INSD:BP583412.1,INSD:BP652694.1,INSD:AV823023.1,
INSD:AV519436.1,INSD:BP819307.1,INSD:DR224071.1,
INSD:EL174681.1,INSD:EL078359.1,INSD:EG517876.1,
INSD:BP641215.1,INSD:EL972010.1,INSD:DR224075.1,
INSD:EH909838.1,INSD:EL991196.1,INSD:AV783915.1,
INSD:EL996324.1,INSD:EL296824.1,INSD:AV795703.1,
INSD:EG517854.1,INSD:BP650755.1,INSD:EG517875.1,
INSD:EH796645.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY101544.1,INSD:BX820308.1,INSD:BX819982.1,
INSD:AF411779.1,INSD:AY086310.1,INSD:BX820153.1"
/note="high-affinity nickel-transport family protein;
FUNCTIONS IN: nickel ion transmembrane transporter
activity, metal ion binding; INVOLVED IN: nickel ion
transport, transmembrane transport, metal ion transport;
LOCATED IN: integral to membrane, chloroplast; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nickel/cobalt
transporter, high-affinity (InterPro:IPR011541); BEST
Arabidopsis thaliana protein match is: high-affinity
nickel-transport family protein (TAIR:AT4G35080.1); Has
403 Blast hits to 399 proteins in 86 species: Archae - 11;
Bacteria - 116; Metazoa - 0; Fungi - 0; Plants - 122;
Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink)."
/db_xref="Araport:AT2G16800"
/db_xref="TAIR:AT2G16800"
intron_pos 103:0 (1/1)
BEGIN
1 MDRLLQPPSS HSIAPSKFQS RPSPLLLHRL HSTNLSTFPS SRRLESRRIS SISCFFRQNP
61 SPDTSPGLNQ SSNFLIASSQ TDASKPNPGF IQRIVSSFEQ RKTISAGMVI LVSAIAALLL
121 NPILVPPAFA SFQTATNSGG AAVVGGKLLR TEVLTSAWTG FFAGCLHTLS GPDHLAALAP
181 LSIGRTRMES AAVGALWGCG HDAGQLIFGL LFLLLKDRLH IEVIRTWGTR VVGLTLLVIG
241 AMGIKEASEM PEPCVVTLEN GETDEKSLKK KKIGFATFAT GIVHGLQPDA LMMVLPALAL
301 PSRIAGASFL IMFLIGTVIA MGSYTVFIGS CSEALKEKVP RITEKLTWAS SLVAIGLGLA
361 IIVSQFFGFS LY
//