LOCUS AEC06525.1 218 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ta11-like non-LTR retrotransposon protein.
ACCESSION CP002685-1537
PROTEIN_ID AEC06525.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G16676"
/inference="Similar to RNA sequence,
EST:INSD:EG501135.1,INSD:EG456828.1,INSD:EG453329.1,
INSD:EG501130.1,INSD:EG453315.1,INSD:EG453322.1,
INSD:EG453327.1,INSD:EG453331.1,INSD:EG456813.1,
INSD:EG501133.1,INSD:EG501145.1,INSD:EG456820.1,
INSD:EG453317.1,INSD:EG456823.1,INSD:EG456812.1,
INSD:EG456809.1,INSD:EG453313.1,INSD:EG453321.1,
INSD:EG453307.1,INSD:EG456815.1,INSD:EG501134.1,
INSD:EG453325.1,INSD:EG453314.1,INSD:EG456811.1,
INSD:EG453328.1,INSD:EG453320.1,INSD:EG501147.1,
INSD:EG456814.1,INSD:EG453326.1,INSD:EG456825.1,
INSD:EG456827.1,INSD:EG456808.1,INSD:EG456821.1,
INSD:EG453316.1,INSD:EG501146.1,INSD:EG453312.1,
INSD:EG501148.1,INSD:EG453318.1,INSD:EG453306.1,
INSD:EG453324.1,INSD:EG436817.1,INSD:EG453332.1,
INSD:EG453311.1,INSD:EG456826.1,INSD:EG456810.1"
/inference="similar to RNA sequence, mRNA:INSD:EF182962.1"
/note="unknown protein; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G02000.1); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="Araport:AT2G16676"
/db_xref="TAIR:AT2G16676"
BEGIN
1 MRGIPLLYVC EATVTEIALG LGQIISLDFH DATTTQIAFI RVRIRFEITD RIRFFQRITF
61 DSGETALIRF QYERLRRICS SCFRLTHHRN YCPYRQPEPR SIIRGPTNNL TRSRREGVCT
121 RDEYHRSSLN SQSQMSENAF PAPIEPPPRV AAPPLNPDEF RAAYFPEGRA GSLPNIGTLN
181 LNPPSRRQEA SRNSNVQPFT GPAFGANVPR VVEVGECS
//