LOCUS AEC06516.1 251 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Translocon-associated protein (TRAP)
, alpha subunit protein.
ACCESSION CP002685-1525
PROTEIN_ID AEC06516.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G16595"
/inference="Similar to RNA sequence,
EST:INSD:EH959278.1,INSD:EL222432.1,INSD:BP661070.1,
INSD:CB254079.1,INSD:EL234899.1,INSD:AU227769.1,
INSD:EL008040.1,INSD:BP850111.1,INSD:BP668799.1,
INSD:CB255578.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT004242.1,INSD:BT015171.1"
/note="Translocon-associated protein (TRAP), alpha
subunit; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system, endoplasmic reticulum; EXPRESSED IN:
20 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Translocon-associated protein
(TRAP), alpha subunit (InterPro:IPR005595); BEST
Arabidopsis thaliana protein match is:
Translocon-associated protein (TRAP), alpha subunit
(TAIR:AT2G21160.1); Has 245 Blast hits to 245 proteins in
98 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 29; Plants - 60; Viruses - 0; Other Eukaryotes - 21
(source: NCBI BLink)."
/db_xref="Araport:AT2G16595"
/db_xref="TAIR:AT2G16595"
intron_pos 22:1 (1/7)
intron_pos 73:1 (2/7)
intron_pos 90:1 (3/7)
intron_pos 119:0 (4/7)
intron_pos 145:0 (5/7)
intron_pos 213:0 (6/7)
intron_pos 237:0 (7/7)
BEGIN
1 MRTSFRLLFF AFLLLVSPFL KVALCQSDSE DSGFEVSDVG EEESDAEEVF GLELTSAPGI
61 ETLCVFPKNS AKIIKAGVET ELLVGMKNDG QSNVDIVAVK GSLHLPFDQN AVQNLTALSF
121 SNASVPTSAQ ATLPYAFAVS KFLQAGAFDF VGTIIYEIDG KPYQSIFYNG TIEVVEDGPL
181 FRMESVFLSG LLIFVIAFLA IYIQNVLKHM TKKTKRAPKV EVGTATKDAS HDEWLEGTSY
241 TQSSSKSKKK K
//