LOCUS AEC06486.1 778 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box family protein protein.
ACCESSION CP002685-1483
PROTEIN_ID AEC06486.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G16365"
/inference="Similar to RNA sequence,
EST:INSD:EL009671.1,INSD:EH972326.1,INSD:EL302072.1,
INSD:EL182113.1,INSD:EG432711.1,INSD:EG432697.1,
INSD:EG432709.1,INSD:EG432694.1,INSD:EG432705.1,
INSD:EL100734.1,INSD:EG426423.1,INSD:EL339125.1,
INSD:EG509105.1,INSD:ES068120.1,INSD:EG432684.1,
INSD:EG432683.1,INSD:EL093423.1,INSD:EL100386.1,
INSD:EH966324.1,INSD:EL296376.1,INSD:EG509866.1,
INSD:EH908040.1,INSD:EH943291.1,INSD:EL308036.1,
INSD:EH819529.1,INSD:EL201187.1,INSD:EG432689.1,
INSD:ES165390.1,INSD:ES209908.1,INSD:EL111322.1,
INSD:EG432717.1,INSD:ES210371.1,INSD:EL003922.1,
INSD:EG432715.1,INSD:EL183127.1,INSD:EG432701.1,
INSD:EG432687.1,INSD:EL048584.1,INSD:EG432703.1,
INSD:EG432686.1,INSD:EH798106.1,INSD:EG432712.1,
INSD:EL178872.1,INSD:EG432699.1,INSD:EG432713.1,
INSD:EG432690.1,INSD:EL233989.1,INSD:EH922665.1,
INSD:EG432706.1,INSD:EH919000.1,INSD:EG426424.1,
INSD:EL030436.1,INSD:EG432710.1,INSD:EL115821.1,
INSD:EL019814.1,INSD:EL260857.1,INSD:AV549718.1,
INSD:EH948543.1,INSD:EG509140.1,INSD:EG432688.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY227650.1,INSD:AY773845.1"
/note="F-box family protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: response to
karrikin; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810); BEST Arabidopsis
thaliana protein match is: F-box family protein
(TAIR:AT2G16300.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="Araport:AT2G16365"
/db_xref="TAIR:AT2G16365"
intron_pos 240:0 (1/3)
intron_pos 455:2 (2/3)
intron_pos 610:0 (3/3)
BEGIN
1 MSEHVMVLGK GNKGISKNSS VNPYESAWLG RWTQSGSEVK FHDGETNCSK QLIRPEDENH
61 GVEVLPFPMF KVSQKRETTT TTTTKPSFHE DVGSSSRAMV NRMPWMYPQG ENFSSSNRLD
121 FPIQEKTTQN LLELIRPVRI YATVDSVNLP KEDSHQLLKG STVSMKLKGK IFGGYLDLFP
181 NQDHSHNRGG VRLQSLESSK DTQEDGPRKN ESSAETNTLE MDRLQTIHLS GSISSSSTKG
241 KGIKGYSAIP RTEIPDMNEE PPLVPDRENS VDGHQGETSN SATQSMNVEH FLSRDCKRVR
301 LEPEVEASSR WVKRLKTSPS DSSETKSMMK MKEASLGEKE NNNLFLEILK SGINNLQPRN
361 QEPVVSQSND LRQGGDDITL LHPWIQRWCK KKTTSTDQPT GQEASFEPES HKEFEKKQYP
421 SIAAMALMGK ALSGLNPYGL RKTNSLMVWN ARDLSFTYRS LRWNLTMADW PLLPNDLLEL
481 IMGHLETSFE IFLFRSVCSS WRSVVPPLDH SRCLGIKTHD ISFNVGFSFN GRPTNEYCTL
541 KKIPIYLVKF WTPFGDDYLL AEMRERNDGE PKLLLSPLSS NGIKYGMGIN KVLFNSLTSP
601 IIPFGQYYEI TYIEKRPSEY RFGFPYKLEW VEITERVEFL KLDSEDSRDF AVLFAGRMCN
661 LVMYRSRNMS WTQVVEHPEK YAYQDLVAFK GKFYAVDSSG RGRVFVVELS FEVTEIPSVG
721 GSQQSSKESL VQSGEELLLV QRFTPVGRRY DEYIYIHGSE CLDLMKKEER ESGFKLMT
//