LOCUS AEC06451.1 197 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana cold regulated 413 plasma membrane 1 protein.
ACCESSION CP002685-1444
PROTEIN_ID AEC06451.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="COR413-PM1"
/locus_tag="AT2G15970"
/gene_synonym="ARABIDOPSIS THALIANA COLD-REGULATED413
PLASMA MEMBRANE 1"
/gene_synonym="ATCOR413-PM1"
/gene_synonym="ATCYP19"
/gene_synonym="COLD ACCLIMATION PROTEIN WCOR413-LIKE
PROTEIN ALPHA FORM"
/gene_synonym="cold regulated 413 plasma membrane 1"
/gene_synonym="CYCLOPHILLIN 19"
/gene_synonym="F19G14.3"
/gene_synonym="F19G14_3"
/gene_synonym="FL3-5A3"
/gene_synonym="WCOR413"
/gene_synonym="WCOR413-LIKE"
/inference="Similar to RNA sequence,
EST:INSD:BP833120.1,INSD:AV442280.1,INSD:BP849464.1,
INSD:CF773774.1,INSD:DR332821.1,INSD:DR332809.1,
INSD:EH854378.1,INSD:DR332870.1,INSD:EH814773.1,
INSD:T21940.1,INSD:BP633730.1,INSD:BP635984.1,
INSD:DR332857.1,INSD:EL274588.1,INSD:H36802.1,
INSD:BP670748.1,INSD:EH986939.1,INSD:DR332889.1,
INSD:BP809118.1,INSD:DR332853.1,INSD:EH864406.1,
INSD:EL231468.1,INSD:EL199890.1,INSD:EH803268.1,
INSD:EH917582.1,INSD:BP853594.1,INSD:DR332862.1,
INSD:EL329862.1,INSD:DR332861.1,INSD:AV781718.1,
INSD:DR332838.1,INSD:EH827767.1,INSD:EL071390.1,
INSD:DR332879.1,INSD:AA728669.1,INSD:EL243170.1,
INSD:CB255754.1,INSD:EH896338.1,INSD:BP815901.1,
INSD:DR332827.1,INSD:EL234598.1,INSD:AA650647.1,
INSD:BP854315.1,INSD:DR332835.1,INSD:EH990784.1,
INSD:DR332843.1,INSD:BP631625.1,INSD:EL266940.1,
INSD:EH973074.1,INSD:DR332834.1,INSD:EL010999.1,
INSD:DR332803.1,INSD:BP663249.1,INSD:DR332863.1,
INSD:DR332883.1,INSD:EH937358.1,INSD:DR332850.1,
INSD:BP658995.1,INSD:BP665710.1,INSD:EH954878.1,
INSD:DR332895.1,INSD:BE037882.1,INSD:BP857539.1,
INSD:AV536820.1,INSD:BP851822.1,INSD:DR332896.1,
INSD:DR332856.1,INSD:DR332846.1,INSD:EL331390.1,
INSD:EH947916.1,INSD:EL214413.1,INSD:DR332828.1,
INSD:EH900697.1,INSD:CB260560.1,INSD:EL045886.1,
INSD:T42795.1,INSD:EL203176.1,INSD:DR332801.1,
INSD:W43270.1,INSD:BP619404.1,INSD:AV440775.1,
INSD:BP800117.1,INSD:T76387.1,INSD:DR332894.1,
INSD:EL127725.1,INSD:DR332816.1,INSD:EL070399.1,
INSD:BP630391.1,INSD:H37253.1,INSD:EH830979.1,
INSD:DR332893.1,INSD:BP859016.1,INSD:DR332799.1,
INSD:DR332892.1,INSD:DR332818.1,INSD:AI996990.1,
INSD:DR332873.1,INSD:BE039567.1,INSD:EL211078.1,
INSD:BP633802.1,INSD:BP825466.1,INSD:DR332887.1,
INSD:EL270032.1,INSD:EL201712.1,INSD:BE038304.1,
INSD:EH906990.1,INSD:DR332876.1,INSD:EL339869.1,
INSD:EH878934.1,INSD:EL122688.1,INSD:DR332822.1,
INSD:BP850920.1,INSD:ES167554.1,INSD:DR332819.1,
INSD:CB258517.1,INSD:BP580013.1,INSD:DR332811.1,
INSD:EL077739.1,INSD:T42949.1,INSD:BP635910.1,
INSD:DR371275.1,INSD:BE038013.1,INSD:AV785416.1,
INSD:BP820265.1,INSD:DR332868.1,INSD:DR332825.1,
INSD:BP826210.1,INSD:EL190526.1,INSD:BP836586.1,
INSD:AV534720.1,INSD:AV555980.1,INSD:DR332869.1,
INSD:DR332855.1,INSD:DR332806.1,INSD:BP806404.1,
INSD:AV544885.1,INSD:EL211982.1,INSD:DR332800.1,
INSD:DR332851.1,INSD:DR332880.1,INSD:DR332832.1,
INSD:BP863532.1,INSD:DR332867.1,INSD:CB259395.1,
INSD:AV558360.1,INSD:ES196427.1,INSD:BP849291.1,
INSD:DR332859.1,INSD:BP560522.1,INSD:EL231171.1,
INSD:EH864602.1,INSD:DR332829.1,INSD:EH904008.1,
INSD:T41871.1,INSD:DR332831.1,INSD:AV544948.1,
INSD:BP593089.1,INSD:BP804681.1,INSD:DR332891.1,
INSD:AV442127.1,INSD:EL187213.1,INSD:EL127047.1,
INSD:EH871633.1,INSD:AV527901.1,INSD:DR332881.1,
INSD:DR332817.1,INSD:EL026851.1,INSD:DR350980.1,
INSD:AV553423.1,INSD:DR332813.1,INSD:AA395771.1,
INSD:BE038130.1,INSD:EH841868.1,INSD:BE037574.1,
INSD:BP634642.1,INSD:EH861561.1,INSD:BP661038.1,
INSD:BP868420.1,INSD:DR332798.1,INSD:DR332884.1,
INSD:EL121505.1,INSD:DR332842.1,INSD:BP624761.1,
INSD:DR332878.1,INSD:DR332837.1,INSD:DR332860.1,
INSD:BP626889.1,INSD:AV824218.1,INSD:DR332845.1,
INSD:BP633174.1,INSD:DR332858.1,INSD:BP809635.1,
INSD:DR332874.1,INSD:DR332877.1,INSD:DR332882.1,
INSD:DR332812.1,INSD:EH862446.1,INSD:DR332886.1,
INSD:BP793516.1,INSD:BP858889.1,INSD:DR332805.1,
INSD:DR332849.1,INSD:BP635495.1,INSD:DR332802.1,
INSD:BP861733.1,INSD:AV520633.1,INSD:DR332888.1,
INSD:DR332836.1,INSD:BP623672.1,INSD:CF652255.1,
INSD:DR332866.1,INSD:EH926790.1,INSD:DR332826.1,
INSD:EL083031.1,INSD:DR332852.1,INSD:DR332830.1,
INSD:AA395866.1,INSD:EH987938.1,INSD:EH911581.1,
INSD:BP848354.1,INSD:EL132445.1,INSD:DR332833.1,
INSD:AV566568.1,INSD:EG462590.1,INSD:CF652492.1,
INSD:DR332823.1,INSD:DR332814.1,INSD:EL129901.1,
INSD:T46253.1,INSD:DR332885.1,INSD:AV553528.1,
INSD:DR332841.1,INSD:CF652992.1,INSD:T75601.1,
INSD:DR332839.1,INSD:BE037930.1,INSD:EL042710.1,
INSD:H36801.1,INSD:DR332872.1,INSD:DR332820.1,
INSD:EL127565.1,INSD:DR332865.1,INSD:ES058225.1,
INSD:EL279547.1,INSD:EL078969.1,INSD:DR332890.1,
INSD:EL051526.1,INSD:BP608864.1,INSD:EH798186.1,
INSD:AV527032.1,INSD:EH958094.1,INSD:EL226766.1,
INSD:DR332875.1,INSD:ES160617.1,INSD:EL081383.1,
INSD:BP859914.1,INSD:CB256362.1,INSD:BP826689.1,
INSD:AV530991.1,INSD:BP835570.1,INSD:DR332810.1,
INSD:H36806.1,INSD:DR332804.1,INSD:BP859805.1,
INSD:DR332848.1,INSD:DR332871.1,INSD:EL122167.1,
INSD:DR332808.1,INSD:BP601158.1,INSD:DR332815.1,
INSD:DR332840.1,INSD:EG522455.1,INSD:DR332864.1,
INSD:EH934653.1,INSD:DR332844.1,INSD:DR332807.1,
INSD:EL326841.1,INSD:DR332847.1,INSD:CB258887.1,
INSD:CF652493.1,INSD:EL121981.1,INSD:EL155738.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821388.1,INSD:AY088558.1,INSD:BX819025.1,
INSD:AY093767.1,INSD:AF283004.1,INSD:AB044404.1,
INSD:BX842058.1,INSD:AY143813.1,INSD:BX820491.1,
INSD:BX821387.1"
/note="cold regulated 413 plasma membrane 1 (COR413-PM1);
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
cold acclimation, cellular response to water deprivation,
response to abscisic acid stimulus; LOCATED IN: plasma
membrane, vacuole; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Cold acclimation WCOR413 (InterPro:IPR008892);
BEST Arabidopsis thaliana protein match is: Cold
acclimation protein WCOR413 family (TAIR:AT4G37220.1); Has
153 Blast hits to 150 proteins in 29 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 153;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G15970"
/db_xref="TAIR:AT2G15970"
intron_pos 57:2 (1/3)
intron_pos 93:2 (2/3)
intron_pos 117:1 (3/3)
BEGIN
1 MPMKSLRNDH GTLKAMIGSD FNELTIAAKN LATHAFTLTG LGFGTSVLEW VASIAAIYLL
61 VLDRTNWKTN MLTSLLIPYI FFSLPSLIFG IFRGEIGKWI AFVAVVVQLF FPKHAREYLE
121 LPVALVLLAV VAPNLIAGTF RDSWIGLAIC LGIGCYLLQE HIRASGGFRN AFTKANGISN
181 TVGIICLVVF PVWALIF
//