LOCUS AEC06430.1 579 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-1418
PROTEIN_ID AEC06430.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G15690"
/gene_synonym="F9O13.34"
/inference="Similar to RNA sequence,
EST:INSD:EL068055.1,INSD:EL006291.1,INSD:BP664025.1,
INSD:AV820454.1,INSD:ES157289.1,INSD:DR224658.1,
INSD:EL015397.1,INSD:AV441112.2,INSD:CB258141.1,
INSD:AV818860.1,INSD:EL247195.1,INSD:DR371568.1,
INSD:EL061127.1,INSD:DN604780.1,INSD:AV442655.1,
INSD:EL116059.1,INSD:ES118146.1,INSD:EH873044.1,
INSD:EH928031.1,INSD:ES106572.1,INSD:DR224659.1,
INSD:AV822266.1,INSD:AV782979.1,INSD:AV832023.1,
INSD:ES085106.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY037247.1,INSD:BX819127.1,INSD:BX820720.1,
INSD:BT005808.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide
repeat (InterPro:IPR002885); BEST Arabidopsis thaliana
protein match is: Pentatricopeptide repeat (PPR)
superfamily protein (TAIR:AT4G32450.1); Has 33034 Blast
hits to 15947 proteins in 677 species: Archae - 2;
Bacteria - 822; Metazoa - 2903; Fungi - 1398; Plants -
25666; Viruses - 35; Other Eukaryotes - 2208 (source: NCBI
BLink)."
/db_xref="Araport:AT2G15690"
/db_xref="TAIR:AT2G15690"
BEGIN
1 MSSLMAIRCA RTQNIVTIGS LLQLRSSFPR LSSQFHFSGT LNSIPIKHLS TSAAANDYHQ
61 NPQSGSPSQH QRPYPPQSFD SQNQTNTNQR VPQSPNQWST QHGGQIPQYG GQNPQHGGQR
121 PPYGGQNPQQ GGQMSQYGGH NPQHGGHRPQ YGGQRPQYGG PGNNYQNQNV QQSNQSQYYT
181 PQQQQQPQPP RSSNQSPNQM NEVAPPPSVE EVMRLCQRRL YKDAIELLDK GAMPDRECFV
241 LLFESCANLK SLEHSKKVHD HFLQSKFRGD PKLNNMVISM FGECSSITDA KRVFDHMVDK
301 DMDSWHLMMC AYSDNGMGDD ALHLFEEMTK HGLKPNEETF LTVFLACATV GGIEEAFLHF
361 DSMKNEHGIS PKTEHYLGVL GVLGKCGHLV EAEQYIRDLP FEPTADFWEA MRNYARLHGD
421 IDLEDYMEEL MVDVDPSKAV INKIPTPPPK SFKETNMVTS KSRILEFRNL TFYKDEAKEM
481 AAKKGVVYVP DTRFVLHDID QEAKEQALLY HSERLAIAYG IICTPPRKTL TIIKNLRVCG
541 DCHNFIKIMS KIIGRVLIVR DNKRFHHFKD GKCSCGDYW
//