LOCUS AEC06412.1 704 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002685-1398
PROTEIN_ID AEC06412.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="MBR1"
/locus_tag="AT2G15530"
/gene_synonym="MED25 BINDING RING-H2 PROTEIN 1"
/inference="Similar to RNA sequence,
EST:INSD:AI997659.1,INSD:EL022164.1,INSD:EL164463.1,
INSD:ES087152.1,INSD:EG472244.1,INSD:AV528111.1,
INSD:ES058206.1,INSD:BG459478.1,INSD:ES159897.1,
INSD:EH974928.1,INSD:EL968423.1,INSD:AV522621.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc
finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana
protein match is: RING/U-box superfamily protein
(TAIR:AT4G34040.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G15530"
/db_xref="TAIR:AT2G15530"
intron_pos 560:0 (1/4)
intron_pos 577:0 (2/4)
intron_pos 610:0 (3/4)
intron_pos 661:0 (4/4)
BEGIN
1 MNPMQGPRSI GGSSTEVNQV DGESIYCTET SLNTMLNPAD TGFPNNSTPS GRPTYASSSS
61 HAAQDHTWWR FGESSSIPGP SDQVNSIGIK TSHQLPQDGT HHFVGYGSEG RQTGLNGMMV
121 DGGVHAGSHI RNVPSFLRGS SSNPMPQHVD MSMDMDSDNC NAQTSGVVIR HNSYGSSLGS
181 SVQAAGESSS GPASPFGGWG SSCKRKALEG SPSHYFSGET PNRIVQTENS ASHASLSQYG
241 ASSSLSLATP SQSSPNVTNH FGRTEQMFGS GGGRAVAASA FHSTRNTDTL SRAGRRLNPR
301 QPQESVAFSV SHGGTSVRPT GSLQQNLPLN SPFVDPPDVR SSSITSGSNT GENQTNIVHL
361 PALTRNIHQY AWDASFSSRA SNPSGIGMPA ERLGPQWETP RSNQEQPLFA PATDMRQPVH
421 DLWNFARGSP GSSVDSLFVP RAGPSSAIHT PQPNPTWIPP QNAPPHNPSR TSELSPWSLF
481 PSIESPSASH GGPLPLLPAG PSVSSNEVTM PSSSNSRSHR SRHRRSGLLL ERQNELLHLR
541 HIGRSLAADG NGRNQIISEI RQVLHAMRRG ENLRVEDYMV FDPLIYQGMT DMHDRHREMR
601 LDVDNMSYEE LLALGERIGD VSTGLSEEVI LKAMKQHKHT SSSPSSVELH QNIEPCCICQ
661 EEYVEGDNLG TLKCGHEFHK DCIKQWVMIK NLCPICKTEA LKTP
//