LOCUS AEC06379.1 362 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002685-1359
PROTEIN_ID AEC06379.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G15260"
/gene_synonym="F27O10.9"
/gene_synonym="F27O10_9"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger,
RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana
protein match is: RING/U-box superfamily protein
(TAIR:AT3G05545.1); Has 153 Blast hits to 139 proteins in
31 species: Archae - 0; Bacteria - 6; Metazoa - 3; Fungi -
12; Plants - 96; Viruses - 0; Other Eukaryotes - 36
(source: NCBI BLink)."
/db_xref="Araport:AT2G15260"
/db_xref="TAIR:AT2G15260"
intron_pos 12:1 (1/5)
intron_pos 152:1 (2/5)
intron_pos 210:0 (3/5)
intron_pos 228:2 (4/5)
intron_pos 324:1 (5/5)
BEGIN
1 MARTIKYRLL IEFHRVNKQV ERIYSKSSGS SNVNEGKRFA FDLNVEPVDE TLDLNVEPVD
61 EENRDALNPV DEENHDSMNH VAKQNHDSSN HVDQEIRDSQ NLIDEENHDS PKDSDYLGDL
121 DLCSICRGAL VNENDVQRTL VTLKCVHKFH LDCIGSAYNA KGFMECPNCR NIEPGHWQFS
181 DGTHFNPNGM IANNEEEEED NDPGSFSQMI VKSEVCPFGC LGQRYPFDPL GRSDISMINA
241 PMNLSCPSTS TVQLNPSDVW ESTQPFLSSR HHLMVEDEIY RMIYGDRIEM GERSGNHRGR
301 ESNGNGDNGG SSTFGGNGNG NGINATVLCS SRTGSSNYFS TSQVKVTIQR LENVHGLIGI
361 SS
//