LOCUS AEC06309.1 412 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TRICHOME BIREFRINGENCE-LIKE 13 protein.
ACCESSION CP002685-1270
PROTEIN_ID AEC06309.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="TBL13"
/locus_tag="AT2G14530"
/gene_synonym="T13P21.9"
/gene_synonym="T13P21_9"
/gene_synonym="TRICHOME BIREFRINGENCE-LIKE 13"
/inference="Similar to RNA sequence,
EST:INSD:ES064047.1,INSD:BX838941.1,INSD:DR275256.1,
INSD:EH810497.1,INSD:BP655648.1,INSD:AV783949.1,
INSD:AV823052.1,INSD:DR275255.1,INSD:AV531725.1,
INSD:BP639703.1,INSD:AV440376.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY074875.1,INSD:AY124844.1,INSD:BX820848.1"
/note="TRICHOME BIREFRINGENCE-LIKE 13 (TBL13); INVOLVED
IN: biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF231, plant
(InterPro:IPR004253); BEST Arabidopsis thaliana protein
match is: Plant protein of unknown function (DUF828)
(TAIR:AT5G64470.2); Has 1334 Blast hits to 1311 proteins
in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 4; Plants - 1330; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink)."
/db_xref="Araport:AT2G14530"
/db_xref="TAIR:AT2G14530"
intron_pos 134:1 (1/5)
intron_pos 193:2 (2/5)
intron_pos 240:2 (3/5)
intron_pos 281:0 (4/5)
intron_pos 326:0 (5/5)
BEGIN
1 MATTSHNKPS LFPLLSLLCF ISIFLLLSLS KRASLSSPKT HRSATVFPPK PDGSLSPLSA
61 TCDFSEGSWI YDPNPRSTRY TSSCKEIFKG WNCIRNNKTN GFEISNWRWK PKHCDLPSFD
121 PLKFLQSHRN TNIGFVGDSL NRNMFVSLFC MLKSVTGELK KWRPAGADRG FTFSQYNLTI
181 AYHRTNLLAR YGRWSANAKG GELESLGFKE GYRVDVDIPD SSWAKASSFH DILILNTGHW
241 WWAPSKFDPV KSPMLFFEGG RPILPPIPPA TGLDRVLNNM VNFVEKTKRP GGIIFFRTQS
301 PRHFEGGDWD QGGTCQRLQP LLPGKVEEFF SVGNNGTNVE VRLVNQHLYN SLKSRSAFHV
361 LDITRMSEYR ADAHPAAAGG KNHDDCMHWC LPGLTDTWND LFVATLHTIK AL
//