LOCUS AEC06308.1 423 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana CBS domain protein (DUF21) protein.
ACCESSION CP002685-1268
PROTEIN_ID AEC06308.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G14520"
/gene_synonym="T13P21.10"
/gene_synonym="T13P21_10"
/inference="Similar to RNA sequence,
EST:INSD:EG442382.1,INSD:AV824980.1,INSD:EG442381.1,
INSD:AV789108.1,INSD:EL076624.1,INSD:EG442272.1,
INSD:EL321999.1,INSD:EG441759.1,INSD:EG442380.1,
INSD:EG441758.1,INSD:EG442273.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY080819.1,INSD:DQ069814.1"
/note="FUNCTIONS IN: molecular_function unknown; INVOLVED
IN: biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF21 (InterPro:IPR002550),
Cystathionine beta-synthase, core (InterPro:IPR000644);
BEST Arabidopsis thaliana protein match is: CBS
domain-containing protein with a domain of unknown
function (DUF21) (TAIR:AT4G33700.1); Has 35333 Blast hits
to 34131 proteins in 2444 species: Archae - 798; Bacteria
- 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G14520"
/db_xref="TAIR:AT2G14520"
intron_pos 60:1 (1/10)
intron_pos 86:0 (2/10)
intron_pos 114:0 (3/10)
intron_pos 152:0 (4/10)
intron_pos 181:0 (5/10)
intron_pos 227:2 (6/10)
intron_pos 257:0 (7/10)
intron_pos 281:2 (8/10)
intron_pos 323:1 (9/10)
intron_pos 410:0 (10/10)
BEGIN
1 MAVEYECCGT SFFIHIAVIV LLVLFAGLMS GLTLGLMSMS LVDLEVLAKS GTPRDRIHAA
61 KILPVVKNQH LLLCTLLICN AAAMEALPIF LDALVTAWGA ILISVTLILL FGEIIPQSVC
121 SRHGLAIGAT VAPFVRVLVW ICLPVAWPIS KLLDFLLGHG RVALFRRAEL KTLVDLHGNE
181 AGKGGELTHD ETTIIAGALE LSEKMAKDAM TPISDTFVID INAKLDRDLM NLILDKGHSR
241 VPVYYEQRTN IIGLVLVKNL LTINPDEEIQ VKNVTIRRIP RVPETLPLYD ILNEFQKGHS
301 HMAVVVRQCD KIHPLQSNDA ANETVNEVRV DVDYERSPQE TKLKRRRSLQ KWKSFPNRAN
361 SLGSRSKRWS KDNDADILQL NEHPLPKLDE EEDAVGIITM EDVIEELLQE EIFDETDHHF
421 EDL
//