LOCUS AEC06300.1 353 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana LL-diaminopimelate protein (DUF295) protein.
ACCESSION CP002685-1256
PROTEIN_ID AEC06300.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G14290"
/gene_synonym="T1O16.12"
/gene_synonym="T1O16_12"
/inference="Similar to RNA sequence,
EST:INSD:EG445497.1,INSD:EG428642.1,INSD:EG428637.1,
INSD:EG428647.1,INSD:EG428638.1,INSD:EG454798.1,
INSD:EG428649.1,INSD:EG428636.1,INSD:EG445499.1,
INSD:EG445091.1,INSD:EG445089.1,INSD:EG428646.1,
INSD:EG428648.1,INSD:EG428644.1,INSD:EG454797.1,
INSD:EG453798.1,INSD:EG428635.1,INSD:EL156348.1,
INSD:EG428645.1,INSD:EG453801.1,INSD:EG445496.1,
INSD:EG428634.1,INSD:EG445092.1,INSD:EG428560.1,
INSD:EG428640.1,INSD:EG428639.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF370584.1,INSD:AY234414.1"
/note="CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like
(InterPro:IPR022364), Protein of unknown function DUF295
(InterPro:IPR005174); BEST Arabidopsis thaliana protein
match is: F-box family protein with a domain of unknown
function (DUF295) (TAIR:AT5G25290.1); Has 351 Blast hits
to 340 proteins in 13 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 349; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G14290"
/db_xref="TAIR:AT2G14290"
BEGIN
1 MGTPNPRTWS ELPPDLLGSI FHRLSFTDFH RAKIVCWNWN LSSKLTVPKK IRSPWLMLFP
61 EGDNEDGSVL LFNPEEEEKI YKTKRYFSGI RFLANSGKWF LLIDSLFNLY IIDVFSENKI
121 DLLPLEESLL DKEESEDLTG LLWVDEKTAE YVVVLFFNFP SGNVGFCKKG DDHYTKIPLH
181 CGVPWRLQGL IDAVLLGYRL YIRTELSYIR ILDLSTQQGF EDVNKYEPFQ VFSSTQDCSI
241 AVTTRGEVLL VKSILDNTTI GSHRRFCIFK NIDYNPQEEV DSLGDEALLL NLGILLPSIA
301 PNSIYFTRHG RIYHKEHFNL DLCVFNLETK TLKRFPSLAN MKLKDAQWFF PGI
//