LOCUS AEC06290.1 234 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana AGAMOUS-like 44 protein.
ACCESSION CP002685-1242
PROTEIN_ID AEC06290.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="AGL44"
/locus_tag="AT2G14210"
/gene_synonym="AGAMOUS-like 44"
/gene_synonym="ANR1"
/gene_synonym="ARABIDOPSIS NITRATE REGULATED 1"
/gene_synonym="F15N24.5"
/gene_synonym="F15N24_5"
/inference="Similar to RNA sequence,
EST:INSD:AU236133.1,INSD:BP574201.1,INSD:BP564364.1,
INSD:BP577676.1,INSD:BP575805.1,INSD:BP800321.1,
INSD:Z34865.1,INSD:Z35000.1,INSD:BP578557.1,
INSD:AU226951.1,INSD:DR750419.1,INSD:BP583036.1,
INSD:DR750418.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK228244.1,INSD:Z97057.1,INSD:BT005861.1"
/note="AGAMOUS-like 44 (AGL44); FUNCTIONS IN: DNA binding,
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: response to nutrient, lateral root
development; LOCATED IN: nucleus; EXPRESSED IN: 7 plant
structures; EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; CONTAINS InterPro DOMAIN/s:
Transcription factor, MADS-box (InterPro:IPR002100),
Transcription factor, K-box (InterPro:IPR002487); BEST
Arabidopsis thaliana protein match is: AGAMOUS-like 21
(TAIR:AT4G37940.1); Has 7244 Blast hits to 7231 proteins
in 902 species: Archae - 0; Bacteria - 10; Metazoa - 640;
Fungi - 309; Plants - 6146; Viruses - 0; Other Eukaryotes
- 139 (source: NCBI BLink)."
/db_xref="Araport:AT2G14210"
/db_xref="TAIR:AT2G14210"
intron_pos 62:2 (1/7)
intron_pos 89:0 (2/7)
intron_pos 109:2 (3/7)
intron_pos 143:0 (4/7)
intron_pos 157:0 (5/7)
intron_pos 185:0 (6/7)
intron_pos 230:2 (7/7)
BEGIN
1 MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KAKELSILCD AEVGVIIFSS TGKLYDYASN
61 SSMKTIIERY NRVKEEQHQL LNHASEIKFW QREVASLQQQ LQYLQECHRK LVGEELSGMN
121 ANDLQNLEDQ LVTSLKGVRL KKDQLMTNEI RELNRKGQII QKENHELQNI VDIMRKENIK
181 LQKKVHGRTN AIEGNSSVDP ISNGTTTYAP PQLQLIQLQP APREKSIRLG LQLS
//