LOCUS AEC06271.1 346 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana retrotransposon ORF-1 protein protein.
ACCESSION CP002685-1217
PROTEIN_ID AEC06271.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G14000"
/gene_synonym="F9B22.11"
/gene_synonym="F9B22_11"
/note="Arabidopsis retrotransposon ORF-1 protein;
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; CONTAINS InterPro DOMAIN/s: Arabidopsis
retrotransposon ORF-1 protein (InterPro:IPR004312); BEST
Arabidopsis thaliana protein match is: Arabidopsis
retrotransposon ORF-1 protein (TAIR:AT3G30820.1); Has 31
Blast hits to 27 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G14000"
/db_xref="TAIR:AT2G14000"
intron_pos 178:0 (1/1)
BEGIN
1 MINFFDLFLS DFLTSLRLFC KVWDEQTTLQ ALLEHVRAIP GHCQKKILTK LLVTDIWDKE
61 DTKLLAALKH IDVRPTRVAC RPSLQVLGLY NDVVTVFQTH GMGWYREIDE DVYPKLVKEF
121 IATCRLTYAN PENPKASQGT LTFFLNKKHY NKTMFEIYDM YGFTKGEAVE FSKLSPTHIT
181 SLLSTTNPVF EHNEQYLVPD PSKTVPRRRR TAEAQPTDEH VISNDEIYED YAYPTSLAHA
241 QPYLLLPEDP TPYRVSPPPA GDDISQQMAW MIALTRKNNS MMHKMWRAIS RIRPCVCTRR
301 GGVDDANREN QSKTIEDRHA ERLVPAAGPS GASTSQPPPE HSQAVA
//