LOCUS AEC06269.1 115 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Homeodomain-like superfamily protein protein.
ACCESSION CP002685-1213
PROTEIN_ID AEC06269.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G13960"
/gene_synonym="F9B22.7"
/gene_synonym="F9B22_7"
/inference="similar to RNA sequence, mRNA:INSD:AY519548.1"
/note="Homeodomain-like superfamily protein; FUNCTIONS IN:
DNA binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription,
DNA-dependent, regulation of transcription; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte,
pollen tube; EXPRESSED DURING: M germinated pollen stage;
CONTAINS InterPro DOMAIN/s: SANT, DNA-binding
(InterPro:IPR001005), Homeodomain-like
(InterPro:IPR009057), Myb, DNA-binding
(InterPro:IPR014778), HTH transcriptional regulator,
Myb-type, DNA-binding (InterPro:IPR017930),
Homeodomain-related (InterPro:IPR012287), Myb
transcription factor (InterPro:IPR015495); BEST
Arabidopsis thaliana protein match is: myb domain protein
3r-5 (TAIR:AT5G02320.2); Has 3768 Blast hits to 2967
proteins in 284 species: Archae - 0; Bacteria - 0; Metazoa
- 842; Fungi - 369; Plants - 1265; Viruses - 6; Other
Eukaryotes - 1286 (source: NCBI BLink)."
/db_xref="Araport:AT2G13960"
/db_xref="TAIR:AT2G13960"
intron_pos 48:0 (1/2)
intron_pos 67:1 (2/2)
BEGIN
1 MKLIDWKDCA LMTYTELILG FCNVLMLICR RTSGPMRRAK GGWTPEEDET LRRAVEKYKG
61 KRWKKIAEFF PERTQVQCLH RWQKVLNPEL VKGPWTQEVL LSFSCSETFF GFHFT
//