LOCUS AEC06268.1 150 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Homeodomain-like superfamily protein protein.
ACCESSION CP002685-1211
PROTEIN_ID AEC06268.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G13960"
/gene_synonym="F9B22.7"
/gene_synonym="F9B22_7"
/inference="Similar to RNA sequence, EST:INSD:AI995333.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821962.1,INSD:BT024758.1,INSD:BX821760.1,
INSD:BX821298.1,INSD:BX821572.1"
/note="Homeodomain-like superfamily protein; FUNCTIONS IN:
DNA binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription,
DNA-dependent, regulation of transcription; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, pollen tube;
EXPRESSED DURING: M germinated pollen stage; CONTAINS
InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005),
Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding
(InterPro:IPR014778), HTH transcriptional regulator,
Myb-type, DNA-binding (InterPro:IPR017930),
Homeodomain-related (InterPro:IPR012287), Myb
transcription factor (InterPro:IPR015495); BEST
Arabidopsis thaliana protein match is: myb domain protein
3r-5 (TAIR:AT5G02320.2); Has 3753 Blast hits to 3002
proteins in 286 species: Archae - 0; Bacteria - 0; Metazoa
- 850; Fungi - 374; Plants - 1226; Viruses - 6; Other
Eukaryotes - 1297 (source: NCBI BLink)."
/db_xref="Araport:AT2G13960"
/db_xref="TAIR:AT2G13960"
intron_pos 15:0 (1/4)
intron_pos 65:2 (2/4)
intron_pos 83:0 (3/4)
intron_pos 102:1 (4/4)
BEGIN
1 MSSSSNPPVC SPEKEERSEM KIEIQCMENK QPLAASCSSA SEGSGCFFLK SPEIATPATV
61 SSFPRRTSGP MRRAKGGWTP EEDETLRRAV EKYKGKRWKK IAEFFPERTQ VQCLHRWQKV
121 LNPELVKGPW TQEVLLSFSC SETFFGFHFT
//